Gordonia terrae: BCM27_22905
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Entry
BCM27_22905 CDS
T04440
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
gta
Gordonia terrae
Pathway
gta03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BCM27_22905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gta03400
]
BCM27_22905
Enzymes [BR:
gta01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
BCM27_22905
DNA repair and recombination proteins [BR:
gta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BCM27_22905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ANY25277
UniProt:
A0AAD0KAL5
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All DBs
Position
5171625..5172395
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AA seq
256 aa
AA seq
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MRIGAHLREDADPLATAAELGIDVFQMFVTDPQSWKKPQPNPRAAEFRESDIDVVVHSSY
QINVASLNNRLRMPSRKAVEQQAAAAAELGAFGLVVHGGHLRDGEDSAEGFANWRKLFDR
QIDKGGFGVPILIENTAGGDHAMARTLESIDRLWEAVGDFDQAGFCLDTCHAWAGGEDLV
GLVERVRQITGRIDLVHLNNSRDEFDSGRDRHANLASGHIDPEVLVAVAEAAGAPVILET
PGDGIPDDLAYLRESL
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcggagcacatcttcgcgaggacgccgacccactggccacggccgccgaactc
gggatcgacgtcttccagatgttcgtcacagaccctcagagctggaagaagccgcagccc
aaccctcgggcggcggagttccgtgagtccgacatcgacgtcgtcgtgcactccagctac
cagatcaacgtcgcgagcctgaacaaccggttgcggatgccgtcgcgcaaggccgtcgaa
cagcaggcggccgctgccgccgagctgggtgccttcggactcgtggtccacggcggccat
ctgcgtgacggcgaggacagcgccgagggtttcgccaactggcgcaagctcttcgaccgc
cagatcgacaaaggcggcttcggcgtcccgatcctgatcgagaacaccgcaggcggcgac
cacgcgatggcgcgcacgctggagtccatcgaccggctgtgggaggccgtcggcgacttc
gatcaggcgggcttctgtctcgacacgtgccacgcctgggcgggcggcgaagacctcgtc
gggctcgtcgagcgggtccgccagatcaccggccggatcgatctggtgcatctcaacaac
tctcgcgacgagttcgactccggccgcgaccggcacgccaacctcgcgtcgggccacatc
gaccccgaggtcctcgtcgcggtcgccgaggcggcgggcgcgccggtcatcctggagacc
ccgggcgacggcattcccgacgacctcgcctatctgcgcgagtcgctgtag
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