Gordonia terrae: BCM27_23540
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Entry
BCM27_23540 CDS
T04440
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
gta
Gordonia terrae
Pathway
gta03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BCM27_23540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gta03400
]
BCM27_23540
DNA repair and recombination proteins [BR:
gta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BCM27_23540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
Extensin_1
Motif
Other DBs
NCBI-ProteinID:
ANY25383
UniProt:
A0AAD0KAT2
LinkDB
All DBs
Position
complement(5310262..5311209)
Genome browser
AA seq
315 aa
AA seq
DB search
MRSIWKGDLSFGLVNVPVKVYSATESHDRKSYQVDSSDGTRIRYRRVREGTDTEVDYGDI
ANAYESESGETVILTKDDLATLPVQKSPEISILEFVPAEQVDPIYFDKPYYLEPSSKSPK
AYVLLAKALEETDRLAIASFTLRNRTRVAALRVVDGVMTLQTLLWPDEVRKPDFGFLDDD
TEIRDQELQMAASLIESMASDYDPSEFEDTYQNELTKLIEAKSEGGEAFPETDDEDNDTE
DSDVADLLAALRASVKDRGEPDSEDKPAEKTTAKKAPAKKAAAKKAPVKKAAAKKTATKS
TAKKAPAKKSSRKAS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcgatctggaagggcgacctcagctttggcctggtcaacgtgccggtcaaggtc
tattccgcgaccgagagtcacgaccgcaagtcctaccaggtcgattcgtcggacggcacc
cgcatccggtaccgccgtgtgcgcgagggcaccgacaccgaggtcgactacggcgacatc
gccaacgcctacgaatccgaatccggcgagacggtgatcctgaccaaggacgacctcgcc
acgctgccggtgcagaagagcccggagatctcgatcctggagttcgtacccgccgagcag
gtcgacccgatctacttcgacaagccctactacctcgagccgtcgtcgaagtcgccgaag
gcgtacgtcctgctggccaaggcgctggaggagacggatcggctcgccatcgcctcgttc
accctgcgcaaccggacacgcgtggccgcgctgcgggtggtcgacggtgtgatgacgttg
cagacgctgctgtggcccgacgaggtccgcaaacccgacttcgggtttctggacgacgac
accgagatccgcgaccaggaactgcagatggcagcgtctctgatcgagtcgatggcctcg
gactacgacccgtcggaattcgaggacacctatcagaacgagctgaccaagctcatcgag
gcgaagtccgagggcggcgaggcgttccccgagaccgacgacgaagacaacgacaccgag
gactccgacgtcgccgatctcctcgccgcgctgcgggcgtcggtgaaggaccgcggggag
ccggactccgaggacaagccggccgagaagacaacggcgaagaaggcaccggccaagaaa
gccgctgccaagaaggcgccggtgaagaaggcggcggccaagaaaacggcaaccaagtcg
actgccaagaaggcgcccgccaagaagtcgtcgcgcaaggcgagctga
DBGET
integrated database retrieval system
