Geobacillus thermoleovorans CCB_US3_UF5: GTCCBUS3UF5_14020
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Entry
GTCCBUS3UF5_14020 CDS
T01676
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gte
Geobacillus thermoleovorans CCB_US3_UF5
Brite
KEGG Orthology (KO) [BR:
gte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gte03032
]
GTCCBUS3UF5_14020
03400 DNA repair and recombination proteins [BR:
gte03400
]
GTCCBUS3UF5_14020
Enzymes [BR:
gte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GTCCBUS3UF5_14020
DNA replication proteins [BR:
gte03032
]
Prokaryotic type
DNA Topoisomerases
GTCCBUS3UF5_14020
DNA repair and recombination proteins [BR:
gte03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GTCCBUS3UF5_14020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AEV18715
LinkDB
All DBs
Position
1295521..1297596
Genome browser
AA seq
691 aa
AA seq
DB search
MSDYLVIVESPTKAKTIERYLGKKYTVKASMGHVRDLPKSQMGVDIDHGYEPKYITIRGK
GQVIKELKTAAKKAKKVFLAADPDREGEAIAWHLAHMLDLDIHSDCRVVFHEITKDAIQQ
SFQQPRAINMNLVDAQQARRVLDRLVGYNISPLLWKKVKKGLSAGRVQSVALRLIIDRER
EIREFQPEEYWTIQATFQKEGETFAASFYSIDGQKRDLKTEADVKAVLDRLNGTAFAVKT
VTKRERKRSPVPPFTTSSLQQEAARKLNFRTKKTMMIAQQLYEGIDLGSEGTVGLITYMR
TDSTRVAETAQQEAAAYIEATFGAMYVNQEKRKEKKSTNAQDAHEAIRPTSAFRDPDKVK
PYLTRDQFRLYKLIWERFIASQMAAAVLDTMSVELENNGVVFRASGSKVKFPGFMKVYIE
GTDDQTEEQDRILPDLEEEETVESETIESKQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQKRNYVVLENKRFVPTELGEIVVELMLEFFPEIIDVEFTAKMEKELDEIEEGK
VEWIKVVDEFYREFEKRLKVAEKEMRAVEIKDEPAGIDCEVCGSPMVYKMGRFGKFIACS
NFPECRHTKPIVKEIGVKCPKCREGNIVERSTKRKRVFYGCDRFPDCDFVSWDKPLARPC
PKCAGLLVEKVLKKGVQVQCTACDYEERLEA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactacttagttatcgtcgaatcgccaacgaaagcgaagacgatcgaacgatac
ttgggaaaaaaatatacagtcaaagcgtcgatgggccacgtccgcgatttgccaaaaagc
caaatgggcgttgatatagaccacggctacgagccgaaatacattacgatccgcggcaaa
ggccaggtgatcaaagagttgaaaacggcggcgaaaaaagcgaaaaaagtgtttcttgcc
gccgaccccgatcgcgaaggagaggcgatcgcctggcatttggcccacatgctcgatctg
gacattcactctgattgccgcgttgtctttcatgagatcacgaaggatgctattcagcaa
tcgtttcagcagccgcgcgcgatcaatatgaatcttgttgacgcccagcaggcgcggcgc
gtgctcgaccgcctcgtcggctataacatcagcccgctcttatggaaaaaggtgaaaaaa
ggattaagcgccggccgcgtccaatcggtggcgctgcgcctcatcatcgatcgggaacga
gaaattcgcgagtttcagccggaagaatattggacgattcaagcgacgtttcaaaaagaa
ggagagacgtttgccgcctcgttttacagtattgacggacaaaagcgcgatttaaagacg
gaggcggatgtgaaagccgtgctggaccgcttaaacggaacggcatttgcggtgaaaacg
gtgacaaaacgagagcgcaagcgcagccccgtgccgccgtttacgacgtcgtcgcttcag
caggaagcggcgcgcaaactgaatttccggacgaaaaagacgatgatgatcgcccagcag
ctgtacgaaggaatcgatcttggcagcgaagggacggtcggtttgatcacgtatatgcgc
accgattcaacgcgcgtcgccgagacggcgcagcaagaggcggcggcatatatcgaggcg
acgttcggcgctatgtatgtcaaccaggaaaagcggaaagagaagaaaagcacgaacgcc
caagacgcccacgaagcgattcgcccgacatcggcatttcgcgatccggacaaagtgaaa
ccgtatttgacgcgcgaccagtttcggttgtataaactcatttgggaacggttcatcgcc
agtcaaatggcggccgccgtgcttgacaccatgagcgtcgagttggaaaacaacggtgtc
gtgttccgcgccagcggctcgaaggtgaaatttccagggtttatgaaagtgtatattgaa
ggaacggacgatcaaacggaagagcaggaccgtatcctcccggatttggaagaagaggaa
acggttgagagcgaaacgatcgaatcgaagcagcactttactcagccgccgccgcgctac
acggaagcccgcctcgtcaaaacgttggaggaactcggcatcggccgcccgtcgacgtat
gccccgacgcttgatacgatccaaaaacgcaactatgtcgtccttgagaacaagcggttt
gtcccgaccgagctcggcgaaatcgttgtagagctgatgctcgaatttttcccggaaatt
atcgatgtcgagtttacggcgaaaatggaaaaagaattggacgaaattgaagaagggaaa
gtggaatggatcaaagtcgtcgacgagttttaccgcgaatttgaaaaacggttgaaagtg
gcggaaaaagaaatgcgcgcagttgagattaaggatgagccggccggcattgactgcgag
gtgtgcggcagtccgatggtgtacaaaatgggccgtttcggcaagtttatcgcctgctcg
aattttccggaatgccgccatacgaagccgattgtcaaagaaatcggcgtcaagtgcccg
aaatgccgcgagggcaacatcgtcgagcgcagcacgaaaagaaagcgggtgttttacggc
tgcgaccgtttcccggattgcgacttcgtctcgtgggataaaccgctcgcccgcccgtgt
ccgaaatgcgcggggctgcttgtggagaaagtgctgaaaaaaggtgtgcaagtgcaatgc
acggcgtgcgattatgaagagcggctagaagcatga
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