Geobacillus thermoleovorans CCB_US3_UF5: GTCCBUS3UF5_16930
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Entry
GTCCBUS3UF5_16930 CDS
T01676
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gte
Geobacillus thermoleovorans CCB_US3_UF5
Pathway
gte03030
DNA replication
gte03430
Mismatch repair
gte03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GTCCBUS3UF5_16930
03430 Mismatch repair
GTCCBUS3UF5_16930
03440 Homologous recombination
GTCCBUS3UF5_16930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gte03032
]
GTCCBUS3UF5_16930
03400 DNA repair and recombination proteins [BR:
gte03400
]
GTCCBUS3UF5_16930
Enzymes [BR:
gte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GTCCBUS3UF5_16930
DNA replication proteins [BR:
gte03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GTCCBUS3UF5_16930
DNA repair and recombination proteins [BR:
gte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GTCCBUS3UF5_16930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AEV19005
UniProt:
A0ABM5MH54
LinkDB
All DBs
Position
1581298..1582026
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AA seq
242 aa
AA seq
DB search
MHERHRFWQRALRLLSLGVPREASSALFGHDHSLQQETWLRSLQKEKQHIIDWHDRLTDI
PFVIIDMETTGFSPEQGDEILAMAAAKTVGGVVTDAYMTLVKPEKPIPEHISALTGIEAK
DVVFAPPLAEALRTFVPFIAAGVLIGYHIGHDLAFLRHALWRHYRQKWSGRFVDLQPMMT
LIGHSCPTFDDALACYGIRCPRRHTADGDVEAMAKLWAILLDEFRQRGIETLHDLYAALS
RC
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcatgagcggcaccggttttggcaacgggcgctccgcttgttgtcgctcggcgttccg
cgcgaggcatcatccgccttatttgggcatgaccattcgctgcaacaggaaacatggctt
cgctcgctgcaaaaggaaaaacagcacatcatcgattggcatgaccgtttgactgacatc
ccgtttgtcatcatcgatatggaaacgaccggcttttccccggagcaaggcgatgaaatt
ttggccatggcggcagcgaaaacggttggaggagtcgtgacggatgcgtacatgacgctc
gtcaagccggaaaagccgattccggaacatatttccgccttgaccgggattgaggcgaag
gatgtggtgttcgctccgccgcttgccgaggcgctgcgcacgtttgtgccgtttattgcc
gccggcgtcttaattggctatcatatcggccatgatttggcgtttttgcgccatgccctt
tggcgccattatcggcaaaaatggagcggacgttttgtcgacttgcagccgatgatgacg
ctgatcggccattcgtgcccgacgtttgacgatgcgttagcttgttatggcatccgttgc
ccgcgccgccatacggcggatggcgacgtcgaagcgatggcgaagctatgggcgatcttg
cttgatgaattccgccagcgcggcatcgaaacattgcatgacttgtacgccgcgctcagc
cggtgttga
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