Geobacillus thermoleovorans CCB_US3_UF5: GTCCBUS3UF5_200
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Entry
GTCCBUS3UF5_200 CDS
T01676
Name
(GenBank) DNA polymerase III (Gamma and tau subunits)
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
gte
Geobacillus thermoleovorans CCB_US3_UF5
Pathway
gte03030
DNA replication
gte03430
Mismatch repair
gte03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GTCCBUS3UF5_200
03430 Mismatch repair
GTCCBUS3UF5_200
03440 Homologous recombination
GTCCBUS3UF5_200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gte03032
]
GTCCBUS3UF5_200
03400 DNA repair and recombination proteins [BR:
gte03400
]
GTCCBUS3UF5_200
Enzymes [BR:
gte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GTCCBUS3UF5_200
DNA replication proteins [BR:
gte03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GTCCBUS3UF5_200
DNA repair and recombination proteins [BR:
gte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GTCCBUS3UF5_200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_30
AAA_22
TIP49
RCF1-5-like_lid
AAA_16
AAA_assoc_2
AAA_5
AAA_24
AAA_19
DnaX_C
PIF1
Rad17
AAA_7
AAA_14
DUF815
Mg_chelatase
DUF5789
Motif
Other DBs
NCBI-ProteinID:
AEV17349
LinkDB
All DBs
Position
25716..27398
Genome browser
AA seq
560 aa
AA seq
DB search
MAYQALYRVFRPQRFADMVGQEHVTKTLQSALLQHKISHAYLFSGPRGTGKTSAAKIFAK
AVNCEQAPAAEPCNECPACLGITNGTVPDVLEIDAASNNRVDEIRDIREKVKFAPTSARY
KVYIIDEVHMLSIGAFNALLKTLEEPPKHVIFILATTEPHKIPTTIISRCQRFDFRRIPL
PAIVSRLKYVASAQGVEASDEALSAIARAADGGMRDALSLLDQAISFSDGKLRLDDVLAM
TGAASFAALSSFIEAIHRKDTAAVLQQLETMMAQGKDPHRLVEDLILYYRDLLLYKTAPY
VEGAIQIAVVDEAFTSLSEMIPVSNLYEAIELLNKSQQEMKWTNHPRLLLEVALVKLCHP
SAAAPSLSASELEPLIKRIETLEAELRRLKEQPPAAPPSTAAPVKKLSKPMKTGGYKAPV
GRIYELLKQATHEDLALVKGCWADVLDTLKRQHKVSHAALLQESEPVAASASAFVLKFKY
EIHCKMATDPTSSVKENVEAILFELTNRRFEMVAIPEGEWGKIREEFIRNKDAMVEKSEE
DPLIAEAKRLFGEELIEIKE
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
gtggcataccaagcgttatatcgcgtgtttcggccgcagcgctttgcggacatggtcggc
caagaacacgtgaccaagacgttgcaaagcgccctgcttcaacataaaatatcgcacgct
tacttattttccggcccgcgcggtacaggaaaaacgagcgcagcgaaaattttcgccaag
gcggtcaactgtgaacaggcgccagcggcggagccatgcaatgagtgtccagcttgcctc
ggcattacgaatggaacggttcccgatgtgctggaaattgacgctgcttccaacaaccgc
gtcgatgaaattcgtgatatccgtgagaaggtgaaatttgcgccgacgtcggcccgctac
aaagtgtatatcatcgacgaggtgcatatgctgtcgatcggtgcgtttaacgcgctgttg
aaaacgttggaggagccgccgaaacacgtcattttcattttggccacgaccgagccgcac
aaaattccgacgacgatcatttcccgctgccaacggttcgattttcgccgcatcccgctt
ccggcgatcgtttcacggctaaagtatgtcgcaagcgcccaaggtgtcgaggcgtccgat
gaggcattgtccgccatcgcccgtgctgcagacggggggatgcgcgatgcgctcagcttg
cttgatcaagccatttcgttcagcgacgggaaacttcggctcgacgacgtgctggcgatg
accggggctgcatcatttgccgccttatcgagcttcatcgaagccatccaccgcaaagat
acagcggcggttcttcagcagttggaaacgatgatggcgcaagggaaagatccgcatcgt
ttggttgaagacttgattttgtactatcgcgatttattgctgtacaaaaccgctccctat
gtggagggagcgattcaaattgctgtcgttgacgaagcgttcacttcactgtcggaaatg
attccggtttccaatttatacgaggccatcgagttgctgaacaaaagccagcaagagatg
aagtggacaaaccacccgcgccttctgttggaagtggcgcttgtgaaactttgccatcca
tcagccgccgccccgtcgctgtcggcttccgagttggaaccgttgataaagcggattgaa
acgctggaggcggaattgcggcgcctgaaggaacaaccgcctgctgcccctccgtcgacc
gccgcgccggtgaaaaaactgtccaaaccgatgaaaacggggggatataaagccccggtt
ggccgcatttacgagctgttgaaacaggcgacgcatgaagatttagctttggtgaaagga
tgctgggcggatgtgctcgacacgttgaaacggcagcataaagtgtcgcacgctgccttg
ctgcaagagagcgagccggttgcagcgagcgcctcagcgtttgtattaaaattcaaatac
gaaatccactgcaaaatggcgaccgatcccacaagttcggtcaaagaaaacgtcgaagcg
attttgtttgagctgacaaaccgccgctttgaaatggtagccattccggagggagaatgg
ggaaaaataagagaagagttcatccgcaataaggacgccatggtggaaaaaagcgaagaa
gatccgttaatcgccgaagcgaagcggctgtttggcgaagagctgatcgaaattaaagaa
taa
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