Geobacillus thermoleovorans CCB_US3_UF5: GTCCBUS3UF5_2690
Help
Entry
GTCCBUS3UF5_2690 CDS
T01676
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gte
Geobacillus thermoleovorans CCB_US3_UF5
Pathway
gte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GTCCBUS3UF5_2690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gte03019
]
GTCCBUS3UF5_2690
03110 Chaperones and folding catalysts [BR:
gte03110
]
GTCCBUS3UF5_2690
03029 Mitochondrial biogenesis [BR:
gte03029
]
GTCCBUS3UF5_2690
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gte04147
]
GTCCBUS3UF5_2690
Enzymes [BR:
gte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
GTCCBUS3UF5_2690
Messenger RNA biogenesis [BR:
gte03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GTCCBUS3UF5_2690
Chaperones and folding catalysts [BR:
gte03110
]
Heat shock proteins
HSP60 / Chaperonin
GTCCBUS3UF5_2690
Mitochondrial biogenesis [BR:
gte03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
GTCCBUS3UF5_2690
Exosome [BR:
gte04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GTCCBUS3UF5_2690
Exosomal proteins of other body fluids (saliva and urine)
GTCCBUS3UF5_2690
Exosomal proteins of breast cancer cells
GTCCBUS3UF5_2690
Exosomal proteins of colorectal cancer cells
GTCCBUS3UF5_2690
Exosomal proteins of bladder cancer cells
GTCCBUS3UF5_2690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AEV17595
LinkDB
All DBs
Position
262840..264456
Genome browser
AA seq
538 aa
AA seq
DB search
MAKQIKFSEEARRAMLRGVDKLADAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE
LEDPFENMGAKLVAEVASKTNDIAGDGTTTATVLAQAMIREGLKNVAAGANPMGIRRGIE
KAVAVAVEELKAISKPIKGKESIAQVAAISAADEEVGQLIAEAMERVGNDGVITLEESKG
FTTELDVVEGMQFDRGYVSPYMITDTEKMEAVLENPYILITDKKVSSIQELLPVLEQVVQ
QGRPLLIIAEDVEGEALATLVVNKLRGTFNAVAVKAPGFGDRRKAMLEDIAILTGGEVIS
EELGRELKSTTIASLGRAAKVVVTKETTTIVEGAGDSERIKARINQIRAQLEETTSEFDR
EKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTALMNI
YNKVAAIEAEGDEATGVKIVLRAIEEPVRQIAQNAGLEGSIIVERLKNEKPGIGFNAATG
EWVDMIEAGIVDPTKVTRSALQNAASVAAMVLTTEAVVADKPEENKGNNNMPDMGGMM
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaaatcaagttcagcgaagaagcgcgccgtgcgatgttgcgcggggtggac
aaacttgcagacgcagtgaaagtcacattaggtccgaaaggccgcaacgtcgtattggag
aaaaaattcggttcgccgctcatcacgaatgacggggtaacaatcgcgaaagaaatcgaa
ctcgaagacccgtttgaaaacatgggcgcgaaattggtcgctgaagtcgccagcaaaacg
aacgacatcgctggggacggtacaacaaccgctacggtattggctcaagcgatgatccgc
gaaggcttgaaaaacgtggctgctggtgccaatccgatgggcatccgccgcgggattgaa
aaagcggttgcggttgctgttgaagaattaaaagccatctccaaaccgatcaaagggaaa
gagtcgatcgcccaagtggctgcgatttcggctgctgatgaagaagtcggtcaattgatc
gctgaagcgatggaacgcgttggcaatgatggcgttatcacgcttgaagagtcgaaaggc
ttcacgacagaactcgacgttgtcgaagggatgcaattcgaccgcggttacgtttcgccg
tacatgattacggatacggaaaaaatggaagccgttctcgaaaatccgtacatcttgatt
acggacaaaaaagtatcgagcatccaagagctgttgcctgttcttgagcaagtcgtgcaa
caaggccgtccgctcttgatcattgcggaagatgttgaaggcgaagcattggcgacgctt
gttgtcaacaaactgcgcggcacgttcaatgcggtagctgtcaaagcgcctggcttcggt
gaccgccgcaaagcgatgctcgaagacatcgcgattttgacaggcggcgaagtgatctcg
gaagagcttggccgtgaattaaaatcgacgacgatcgcgtcgcttggtcgtgcggcgaaa
gttgttgtcacgaaagaaacgacgacgatcgtcgaaggcgctggcgattcggagcgcatc
aaagcgcgcatcaaccaaatccgtgcgcagcttgaagaaacgacgtccgaattcgatcgc
gaaaaactgcaagaacgcttggcgaaattggctggcggcgtagcggtcatcaaagtcggt
gcggcaacagaaacagaattgaaagaacgcaaactgcgcatcgaagacgcgctcaactcg
actcgtgcggctgttgaagaaggcattgtcgccggcggtggcacggctctcatgaacatc
tacaacaaagtcgctgccatcgaagcggaaggcgatgaagcaaccggtgtgaaaatcgta
ttgcgcgcgatcgaagaaccggttcgtcaaatcgcgcaaaacgctggtctggaaggctcg
atcatcgttgagcgcctgaaaaacgaaaaaccgggcatcggcttcaatgcggcaacaggt
gaatgggtcgacatgatcgaagctggtatcgttgacccgacgaaagtcactcgttcggcg
ctgcaaaacgctgcatctgtcgccgcaatggtcttgacgacagaagcggtcgttgccgac
aaaccggaagaaaacaaaggcaacaacaacatgccggatatgggcggcatgatgtaa
DBGET
integrated database retrieval system
