Geobacillus thermoleovorans CCB_US3_UF5: GTCCBUS3UF5_27900
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Entry
GTCCBUS3UF5_27900 CDS
T01676
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
gte
Geobacillus thermoleovorans CCB_US3_UF5
Brite
KEGG Orthology (KO) [BR:
gte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gte03019
]
GTCCBUS3UF5_27900
03009 Ribosome biogenesis [BR:
gte03009
]
GTCCBUS3UF5_27900
Enzymes [BR:
gte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GTCCBUS3UF5_27900
Messenger RNA biogenesis [BR:
gte03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GTCCBUS3UF5_27900
Ribosome biogenesis [BR:
gte03009
]
Prokaryotic type
rRNA helicases
GTCCBUS3UF5_27900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
AAA_19
Flavi_DEAD
DUF7117
Motif
Other DBs
NCBI-ProteinID:
AEV20093
LinkDB
All DBs
Position
complement(2554586..2555896)
Genome browser
AA seq
436 aa
AA seq
DB search
MTETQFTRFSFQPFIIEAIKTLRFYKPTEIQERIIPGALRGESMVGQSQTGTGKTHAYLL
PIIEKIKPERAEVQAVITAPTRELATQIYHETLKITKFCPKDRMIVARCLIGGTDKQKAL
EKLNVQPHIVIGTPGRINDFIREQALDVHTAHILVVDEADLMLDMGFITDVDQIAARMPK
DLQMLVFSATIPEKLKPFLKKYMENPTFVHVDPKRTANQNIEHVLIPLRGREKTKLLRDV
LLSYNPYLAIVFVNTRKMADEVADRLAEQGLKVGVLHGDLTPRERRKMMNLIRDLEFQYV
VATDLAARGIDIEGVSHVINYELPDDLQFYIHRAGRTARAGYSGIAATIYEPSDQDAIAR
LEKMGISFVHRDLVRGEWKELPPWNRRSKRAGEKDDELALLFAKLKKTKQVKPGYKKKLR
AELEKKKKRLGRFKKS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaacgcagttcactcgtttttcatttcagccgtttatcatcgaagcgatcaag
acgcttcgtttttataaaccgacggaaattcaagagcgcatcattccgggggcgctgcgc
ggcgaaagcatggtcggccaatcgcaaaccggaacgggaaaaacacatgcgtacttattg
ccgatcattgaaaaaatcaagccggaacgcgccgaagtgcaagccgtcatcacggcgccg
acgcgcgagttagcgacgcaaatttatcacgaaacgctgaaaattacgaagttttgcccg
aaagatcggatgatcgtcgcccgttgcttgatcggcgggacggataagcaaaaagcgctc
gaaaagctcaacgtgcagccgcatattgtcatcggcacgccggggcgcatcaacgatttc
attcgcgagcaggcgcttgatgtgcatacggcccacatccttgtcgtcgatgaagctgac
ttgatgctcgatatgggctttatcactgatgtcgaccaaatcgccgcccggatgccgaaa
gacttgcaaatgctcgtcttttcagcgacgattccggaaaagctgaagccgtttttgaaa
aaatatatggaaaacccgacctttgtccacgtcgacccgaagcggacggcgaaccaaaac
atcgaacatgtgctcatcccgctgcgtggacgcgagaaaacaaaactgctccgtgatgtg
ctcctcagctacaacccgtatttggccatcgtatttgtcaacacaaggaaaatggctgac
gaggtcgccgaccgtctcgctgagcaagggttgaaagtcggcgtgctgcacggcgatttg
acgccgcgcgagcggagaaagatgatgaatcttatccgcgatttggagtttcaatatgtc
gtcgcgaccgatttggcggcgcgcggcatcgatattgaaggcgtcagtcatgtcatcaac
tacgagttgcctgatgatctgcagttttatattcaccgcgccggacggacggcgcgcgct
ggctatagcggcattgcggcgacgatttacgagccgtctgaccaagatgcgattgctcgg
ttggaaaaaatgggaatttcgtttgtccaccgtgatctcgtgcgcggcgaatggaaggag
ctgccgccgtggaaccggcggagcaagcgggcgggcgaaaaagatgacgaactggcgctg
cttttcgccaaactgaaaaaaacgaagcaggtgaagccgggctacaaaaaaaagttgcgc
gcggagctggagaagaagaaaaagcggcttggccgcttcaaaaaatcataa
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