Geobacillus thermoleovorans CCB_US3_UF5: GTCCBUS3UF5_30750
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Entry
GTCCBUS3UF5_30750 CDS
T01676
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gte
Geobacillus thermoleovorans CCB_US3_UF5
Pathway
gte03030
DNA replication
gte03410
Base excision repair
gte03420
Nucleotide excision repair
gte03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GTCCBUS3UF5_30750
03410 Base excision repair
GTCCBUS3UF5_30750
03420 Nucleotide excision repair
GTCCBUS3UF5_30750
03440 Homologous recombination
GTCCBUS3UF5_30750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gte03032
]
GTCCBUS3UF5_30750
03400 DNA repair and recombination proteins [BR:
gte03400
]
GTCCBUS3UF5_30750
Enzymes [BR:
gte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GTCCBUS3UF5_30750
DNA replication proteins [BR:
gte03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GTCCBUS3UF5_30750
DNA repair and recombination proteins [BR:
gte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GTCCBUS3UF5_30750
NER (nucleotide excision repair)
GGR (global genome repair) factors
GTCCBUS3UF5_30750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
Enkurin
HHH_2
DUF3913
XPG_I
Motif
Other DBs
NCBI-ProteinID:
AEV20377
LinkDB
All DBs
Position
complement(2821821..2824451)
Genome browser
AA seq
876 aa
AA seq
DB search
MKKKLVLIDGSSVAYRAFFALPLLHNDKGIHTNAVYGFTMMLNKILAEEEPTHMLVAFDA
GKTTFRHEAFQEYKGGRQQTPPELSEQFPLLRELLRAYRIPAYELENYEADDIIGTLAAR
AEQEGFEVKVISGDRDLTQLASPHVTVDITKKGITDIEPYTPETVREKYGLTPEQIVDLK
GLMGDKSDNIPGVPGIGEKTAVKLLKQFGTVENVLASIDEIKGEKLKETLRQHREMALLS
KKLAAIRRDAPVELSLDDIVYQGEDREKVVALFKELGFQSFLEKMESPSSEEEKPLAKMA
FTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETALADPQFVAW
LGDETKKKSMFDSKRAAVALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKMKQYE
AVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIWALERPFLDELRRNEQDRLLVELEQP
LSSILAEMEFAGVKVDTKRLEQMGEELAEQLRTVEQRIYELAGQEFNINSPKQLGVILFE
KLQLPVLKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPDTK
KVHTIFNQALTQTGRLSSTEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQIELR
VLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNFGIVYGISDYG
LAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRN
FNVRSFAERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQARLLLQVHDELILEAPKEE
MERLCRLVPEVMEQAVTLRVPLKVDYHYGSTWYDAK
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaaaagcttgttttaatcgacggcagcagcgtggcgtaccgcgcctttttcgcc
ttgccgcttttgcataacgacaaaggcatccatacgaacgccgtctacgggtttacgatg
atgttgaataaaattttggcggaagaagagccaactcatatgcttgtcgcgtttgacgcc
gggaaaacgacgttccggcatgaagcgtttcaagagtataaaggtgggcgccagcagacg
ccaccggagctgtcggagcagtttccgctgttgcgcgagctgctgagggcgtatcgcatc
cccgcctatgaactcgagaactacgaagcggacgatattatcggaacgcttgccgcccgc
gctgagcaggaagggtttgaggtgaaagtcatttccggcgaccgcgatctgacccagctc
gcctccccccatgtgacggtggacattacgaaaaaagggattaccgatatcgaaccgtac
acgccggagacggtccgcgaaaaatacggcttaactccggaacaaatcgttgatttgaaa
ggattgatgggcgacaaatcggacaacattcccggagtgccgggcatcggggaaaagacg
gcggtcaagctgctcaagcaattcggcacggtcgaaaacgtgcttgcctccattgacgag
atcaaaggcgaaaagttgaaagaaacgctgcgccaacaccgggagatggcgctgttaagc
aaaaagctcgccgccattcgccgcgacgccccggtcgagctctcgcttgatgacatcgtc
tatcaaggggaagaccgggagaaagtggtcgctttatttaaagagcttgggtttcaatcg
tttttagagaaaatggaatcgccgtcatcagaagaggaaaaaccgcttgccaagatggca
tttacgcttgctgaccgcgtgacggaggagatgcttgccgacaaggcggcgcttgtcgtt
gaagtggtcgaggaaaattatcatgatgcgccgatcgtcggcatcgctgtggtcaacgaa
catggacggtttttcctgcgcccggagacggcgcttgccgatccgcagtttgtcgcctgg
cttggtgatgaaacgaagaaaaaaagcatgtttgactcaaagcgcgcggcagtcgccttg
aaatggaaaggaattgagctatgcggcgtttcctttgatttattgctggccgcctatttg
cttgatccggcgcaaggtgttgatgatgtggctgccgcagcaaaaatgaagcaatacgaa
gcggtgcgcccggatgaagcggtgtatggcaaaggggcgaagcgggccgtgccggatgag
ccagtgctcgccgagcatctcgtccgcaaggcggcggcgatttgggcgctcgaacggccg
tttttggatgagctgcgccgcaacgaacaagatcggttgctcgtcgagctcgagcagccg
ttgtcttcgattttggcggaaatggaatttgccggagtgaaagtggatacgaagcggctc
gaacagatgggcgaagagctcgccgagcagctgcgcacggtcgagcagcgcatttatgag
ctcgccggccaagaattcaacatcaattcaccgaaacagctcggcgtcattttatttgaa
aaactgcagctgcccgtcttgaaaaaaacgaaaaccggctactccacttcggcggatgtg
cttgaaaaacttgcgccttatcacgagatcgtggaaaacattttgcattaccgccagctt
ggcaagttgcagtcgacgtatattgaaggattgctgaaagtcgtgcgacccgatacaaag
aaggtgcatacgattttcaatcaggcgttgacgcaaaccggacggctcagctcgacggag
ccgaacttgcaaaacattccgattcggcttgaggaaggacggaaaatccgccaagcgttc
gtgccgtcggagtctgattggctcattttcgctgccgactactcgcaaattgagttgcgc
gtcctcgcccatattgcggaagatgacaatttaatggaagcgttccgccgcgatttggat
atccatacgaaaacagcgatggacattttccaagtgagcgaggacgaagtgacgcccaac
atgcgccgtcaggcgaaggcggtcaactttgggatcgtttacgggatcagtgattacggc
ttggcgcaaaacttaaatatttcacgcaaagaggccgctgaattcatcgagcgctacttc
gaaagcttccctggcgtgaagcggtatatggaaaacattgtgcaagaagcaaaacagaaa
gggtatgtgacgacgctgctgcatcggcgccgctatttgccggatatcacgagccgcaac
ttcaacgtccgcagctttgctgaacggatggcgatgaacacgccgattcaagggagcgcc
gctgacattattaaaaaggcgatgatcgatctgaacgccagactgaaggaagagcggctg
caagcgcgccttttgctacaggtgcatgacgagctcattttggaggcgccgaaagaagag
atggagcggctgtgccggctcgttccggaagtgatggagcaagcggtcacacttcgcgtg
ccgctcaaagtcgattaccattatggctcgacgtggtatgacgcgaaataa
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