Geobacillus thermoleovorans CCB_US3_UF5: GTCCBUS3UF5_34590
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Entry
GTCCBUS3UF5_34590 CDS
T01676
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
gte
Geobacillus thermoleovorans CCB_US3_UF5
Pathway
gte03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GTCCBUS3UF5_34590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gte03400
]
GTCCBUS3UF5_34590
DNA repair and recombination proteins [BR:
gte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GTCCBUS3UF5_34590
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GTCCBUS3UF5_34590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
RsgA_GTPase
AAA_25
AAA_21
AAA_22
APS_kinase
nSTAND3
AAA_33
AAA_23
DnaJ_CXXCXGXG
ATPase
NACHT
BCA_ABC_TP_C
ATPase_2
cobW
MeaB
NB-ARC
Viral_helicase1
NTPase_1
HUTI_composite_bact
Mtrc-MtrF_II-IV_dom
Motif
Other DBs
NCBI-ProteinID:
AEV20760
LinkDB
All DBs
Position
complement(3173812..3176679)
Genome browser
AA seq
955 aa
AA seq
DB search
MNGMDKIVVKGARAHNLKNIDVEIPRGKLVVLTGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLGQMEKPDVDAIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARIGR
PICPTHGIEIQSQTIEQMVDRLLAYPERTKMQILAPIVSGKKGTHAKTLEDIRKQGYVRV
RIDGEMRELTEDIELEKNKKHSIDVVVDRIIIKDGIAARLADSLETALKLADGKVVVDVI
GEGELLFSEKHACPYCGFSIGELEPRLFSFNSPFGACPDCDGLGAKLEVDLDLVIPNDEL
TLKEHAIAPWEPQSSQYYPQLLEAVCRHYGIPMDVPVRDLPKEQLDKILYGSGGEPIYFR
YTNDFGQVREQYIAFEGVIPNVERRYRETSSDYIREQMEKYMAEQPCPTCQGYRLKKESL
AVLVGGKHIGEVTAMSVTEALAFFDGLELTEKEAQIARLILREIRDRLGFLQNVGLDYLT
LSRSAGTLSGGEAQRIRLATQIGSRLTGVLYVLDEPSIGLHQRDNDRLIATLKSMRDLGN
TLIVVEHDEDTMLAADYLIDIGPGAGIHGGEVVAAGTPEEVMNDPNSLTGQYLSGKKFIP
IPTERRRPDGRWLEVVGAREHNLKNVSVKIPLGTFVAVTGVSGSGKSTLVNEVLYKALAQ
KLHRAKAKPGEHRGIRGLEHLDKVIDIDQSPIGRTPRSNPATYTGVFDDIRDVFASTNEA
KVRGYKKGRFSFNVKGGRCEACHGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVTYK
GKNIAEVLDMTVEDALDFFASIPKIKRKLETLYDVGLGYMKLGQPATTLSGGEAQRVKLA
AELHRRSNGRTLYILDEPTTGLHVDDIARLLDVLHRLVDNGDTVLVIEHNLDVIKTADYI
IDLGPEGGDRGGQIVAVGTPEEVAEVEESHTGRYLKPILERDRARMQAQYEAVKA
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaatggataaaattgtcgtcaaaggggcgcgcgcccacaacttgaaaaacatt
gacgtcgaaatcccgcgcggcaagctcgtcgtcttgaccgggctgtccgggtcggggaag
tcgtcgctggcgtttgatacgatttacgcggaaggccagcgccgctacgtcgaatcgctg
tcggcgtatgcccgccagtttttagggcagatggaaaaaccggacgtcgatgcgattgaa
gggttgtcgccggccatttcgatcgatcaaaaaacgacgagccgcaacccgcgctcaacc
gtcggcacggtgacggaaatttacgattatttacggctgctgttcgcccgcatcggccgc
cccatttgcccgacgcacggcattgaaatccaatcgcagacgatcgagcaaatggtcgac
cggctgctcgcttacccggagcggacgaaaatgcaaattttggcgccgatcgtctcggga
aaaaaagggacgcacgccaagacattggaggatattcgcaaacaagggtatgtgcgcgtc
cgcattgacggcgagatgcgcgagttgacggaggacattgagctggaaaaaaacaaaaaa
cattcgattgatgtcgtcgtcgaccgcatcatcatcaaagacggcatcgccgccaggctt
gccgattcgcttgagacggcgctgaagctcgccgacggcaaagtggtcgttgacgtgatc
ggcgagggggagctcttgttcagcgaaaagcacgcttgtccgtactgcggcttttcgatc
ggggagcttgaaccgcgtctgttttcgttcaacagtccattcggcgcctgcccggactgc
gacgggctcggggcgaagctcgaagtggatctcgatttggtcatcccgaacgatgagctg
acgttaaaagaacacgccatcgctccgtgggagccgcaaagctcgcaatattacccgcag
ctgctcgaagccgtgtgccgccattacggcatcccgatggacgtgccggtcagagatttg
ccaaaagagcagctcgataaaattttgtacggcagcggcggggagccgatttacttccgc
tatacgaatgatttcgggcaagtgcgcgaacaatacatcgcatttgaaggcgtcattccg
aacgtcgaacgccgctatcgcgagacgagctcggactacatccgcgagcagatggaaaag
tatatggcggaacaaccatgtccgacatgccaaggctaccggctgaaaaaagaaagcctg
gccgtccttgtcggcggcaagcatatcggcgaggtcaccgccatgtcggtgaccgaggcg
ctcgccttttttgacggtctcgagctgacggaaaaagaagcgcaaatcgcccgcctcatt
ttgcgtgaaattcgcgaccggctcggctttttgcaaaacgtcggcctcgactatttgacg
ctcagccgctcggcaggaacgctctccggcggcgaggcgcagcgcatccgcttggcgacg
cagatcggctcgcggctgacgggggtgctgtacgtgctcgacgagccgtcgatcgggctt
catcagcgcgacaacgaccggctgatcgcgacgttgaaaagcatgcgcgacctcggcaat
acgctcattgtggtggagcacgacgaggataccatgctggccgcggactatttgattgac
attggtccgggggcgggcatccacggcggcgaggtcgtcgccgccggcacgccggaagaa
gtgatgaacgacccgaactcgctcaccggccagtatttatcggggaaaaaattcatcccg
attccgaccgagcgtcgccgtccggacggacgttggcttgaggtcgtcggcgcgcgcgag
cataacttgaaaaacgtatcggtgaaaatcccgctcggcacgtttgtcgctgtcaccggg
gtgtcgggctcgggcaaaagcacgctcgtgaacgaagtgttgtataaggcgctggcgcaa
aagctgcaccgggcgaaggcgaaaccgggcgagcatcgcggcatccgcgggctggagcat
ctcgataaagtcattgacatcgaccagtcgccgatcggccgcacgccacgctcgaacccg
gcgacgtacaccggggtgtttgacgacatccgcgacgtgtttgcctcgacgaacgaagcg
aaagtgcgcggctacaaaaaagggcggttcagcttcaatgtcaaaggcgggcgctgcgag
gcgtgccatggcgatggcatcatcaaaattgagatgcactttttgccggacgtgtacgtc
ccgtgcgaagtgtgccacggcaaacggtacaaccgcgagacgctcgaggtgacgtataaa
ggaaaaaacatcgccgaggtgctcgacatgacggtcgaagatgcgctcgactttttcgcc
tcgatcccgaaaatcaaacgcaagctcgagacgctctatgacgtcgggctcggttatatg
aagctcggccagccggcgacgacgctctcgggcggcgaggcgcagcgcgtcaagctcgcc
gctgagcttcaccgccgctccaacggccggacgctctacattttggacgagccgacgacc
gggcttcatgtcgatgacatcgcccggctgcttgatgtgctccaccggctcgtcgacaac
ggcgataccgtgcttgtcattgaacataacttggacgtcatcaaaaccgcggactatatc
attgacttaggtccggaaggcggcgaccgaggcggacaaatcgtcgctgtcggcacgccg
gaagaggtggccgaggtggaggagtcgcacaccggccgctacttaaaaccgattctcgag
cgcgaccgggcgcgcatgcaggcgcaatatgaagcggtgaaggcgtaa
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