Geobacillus thermoleovorans CCB_US3_UF5: GTCCBUS3UF5_7160
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Entry
GTCCBUS3UF5_7160 CDS
T01676
Name
(GenBank) 3'-5' exoribonuclease yhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
gte
Geobacillus thermoleovorans CCB_US3_UF5
Brite
KEGG Orthology (KO) [BR:
gte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gte03019
]
GTCCBUS3UF5_7160
Messenger RNA biogenesis [BR:
gte03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GTCCBUS3UF5_7160
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AEV18039
UniProt:
A0ABN3ZQR5
LinkDB
All DBs
Position
680485..681555
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AA seq
356 aa
AA seq
DB search
MFPCRFGKAFFLPSNRYDILESTYRETEENEVAKGIIHYEVGEQVDLFLLIKSATKGIAS
NGKPFLTLILQDKSGDIEAKLWDVSPDDEERYVPECIVKVAGDIHNYRGKLQLRIRSIRP
AHPGDAVRIDDFLEKAPLGREEMKAKVMEYIFAMENPNIQRITRYLLKKYEKAFFEYPAA
TKNHHEFISGLAYHVVSMLELAKALIHLYPSLNKDLLYAGVILHDLGKVIELSGPVSAAY
TLEGNLLGHISIMVSEISKAAEQLGIQGEEVVILQHLVLAHHGKAEWGSPKPPLVKEAEV
LHYIDNLDAKITMIDRALEKVKPGEFTERVFALDNRSFYKPAFLSVSKPKNPGSKE
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtttccttgccgtttcggcaaggctttctttttgccctctaaccgttatgatatacta
gaaagtacgtacagagaaacggaggagaacgaagtggcgaaaggcatcatccattatgag
gttggggaacaagttgatctctttttgctcatcaaatcagcaacgaaaggcatcgccagc
aacggcaagccgttcttaactttgattttgcaagataaaagcggcgacattgaagccaaa
ctgtgggatgtctcgccggatgacgaagagcggtatgtgccggagtgcatcgtcaaagtg
gcgggagacatccataactaccgcggcaaattgcagctgcgcatccgttcgatccgtcct
gctcatccgggcgatgccgtgcgcatcgatgactttttggagaaggctccgctcggccgc
gaggaaatgaaggcgaaagtcatggaatacatatttgcgatggaaaatccaaacatccag
cgcattacccgctatttgttgaaaaaatacgaaaaggcgttttttgagtatccagcggcg
acgaaaaaccatcatgaatttatctccggactggcgtaccacgtcgtgtcgatgctcgag
ctcgccaaggcgctcatccatctctatccgtcgctcaataaagatttgctttatgccggc
gtcattttgcatgaccttggcaaagtgattgaactatccggtccggtatcggcggcgtat
acgcttgaaggaaatttgctcggacacatttcgatcatggtgagcgagatcagcaaggcg
gcggaacagctcggcattcaaggtgaagaagttgtcattttgcagcatcttgtgctcgcg
catcatggcaaggcggagtggggcagcccgaagccgccgctcgtcaaagaagctgaggtg
cttcattacattgacaatttggatgcgaaaattacgatgatcgaccgcgcgctcgagaag
gtgaagccgggcgagtttacggaacgcgtttttgcccttgacaaccgctcgttttacaaa
ccagcgtttttgtctgtttcaaagccaaaaaatccgggtagtaaagagtag
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