Geobacillus thermoleovorans CCB_US3_UF5: GTCCBUS3UF5_7560
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Entry
GTCCBUS3UF5_7560 CDS
T01676
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
gte
Geobacillus thermoleovorans CCB_US3_UF5
Brite
KEGG Orthology (KO) [BR:
gte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gte03400
]
GTCCBUS3UF5_7560
Enzymes [BR:
gte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GTCCBUS3UF5_7560
DNA repair and recombination proteins [BR:
gte03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GTCCBUS3UF5_7560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
AAA_22
DEAD
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AEV18079
UniProt:
A0ABN3ZX95
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All DBs
Position
709151..712669
Genome browser
AA seq
1172 aa
AA seq
DB search
MVVDTMSLRFLLGRSGSGKTAVCLEEIRRQLQEDPKGRAIVYLVPEQMTFQCEYALIHTE
GVGGMIRAQVFSFTRLAWRVLQETGGMTRYHIHDVGVQMMIRKIIEQRKQELKLFGRAAD
KHGFIEQLNEMITECKRYCLTPGELRRHAKAFEDGPSQPGRRLLADKLSDVALVYEELER
SLIGHYLDSEDYLRLLAEHIPRSSYLRDADIYIDGFHHFAPQEYMIIEQLLRHCRRVTVC
LTIDRPYDDGMPDELHLFYLPAQTYRQLRELALSNDIAIEEPIVLSANRRHEDRALVHLE
AQFHRRPLLPYGAKTDAVHLYEASNRRAEIEAVAREIIRLVRDEGARYRDIALIIRQTEA
YRDLVKTVFFDFGIPYFMDEKEPMHHHPLIELVRAALETVVTRWRYEAVFRAVKTDLLFP
TDGDLHMWREAADKLENYVLAYGIKGDKWTNNERWAYRRYQALDGLNVPQTDEERQFEDM
LNEWREALAAPLRRLERRLRRAEDGRGFCMALYLFLEELQIPKKLEKMSAQAEADGRLVE
ARQHEQAWNAVVDLLDQYVEMLGTESLPLAEFVKIIEAGLDRLEFSLVPPAMDQVIVAQL
DRSRLIDIKYAFVIGANDGVIPAKVKEDGLMAEVEREQLRELGVALAPGGREQLFYDPFF
VYLALVCPSRRLYVTYPLADGEGKALMPSPLIKQLTELFPHAPVHLCGNDPFDAPAEKAE
AFVTAPRATQTYLISQLRAWKRNYGIDPLWWDVYNTFIGHRDWKEQVRHAVSALFYTNGA
TPLKKQWSQRLYGKKIQASVSRMEQFQKCPYAHFASHGLRLKERNVFRLEAPDVGQLFHA
AIKQIADRLREQHLDWRELSRPDCERLSAEAVERIAPLIQQQVLSSSHRYEYMKRKLKHV
VARTTHVLSEHARASGFVPIGLELSFGPNGDLPPLRFRLPDGTVMELVGRIDRVDKAESS
QGVLLRIIDYKSSAKTLDLTEVYYGLALQMLTYLDIVLTYAEQLVGQPALPAGVLYFHIH
NPIVQAKQWVDDEVEMAKKLLEPFRMRGLLLADVEAIRLMDGRTEDGQWSLIVPAQLTKS
GSIHSRSSVASPSDFAALRQHVRRLFIDIGGQIADGVVSIAPYKLKDKTACEFCVFKPVC
QFDEALSGNEYRKLAPQTKEAVIEKLAEGKEG
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggatacaatgtcgctgcggtttttgctcggacggtcaggaagtgggaaaacg
gctgtctgcctcgaagaaattcgccgccagttgcaagaggatccaaaaggaagggcgatc
gtctatctcgttccggagcaaatgacatttcaatgcgaatacgcgttgatacataccgag
ggagtgggcgggatgattcgcgcccaagtgttcagcttcacccgtctcgcttggcgcgtg
ttgcaggaaacaggcggcatgacccggtaccatattcatgatgttggtgtgcagatgatg
atccgcaaaattattgagcaacgcaaacaagagctgaaactgtttggccgcgcggcggac
aaacatgggtttatcgagcagctgaacgaaatgatcaccgaatgcaaacggtattgcctg
acgccgggcgaactccgccgacatgccaaggcgttcgaggatgggccaagccagccgggc
cgccgcttgctcgctgacaagttgagcgatgtcgcgcttgtgtatgaggaacttgagcgg
agtcttatcggccactatcttgattcggaagattatttgcgcttgctcgctgagcatatt
ccgcgctcaagttatttgcgggatgccgatatttacatcgacggctttcatcattttgcg
ccgcaagaatatatgatcatcgaacagcttcttcgccattgccggcgcgtcaccgtttgt
ttgacgatcgaccgcccgtatgacgacggaatgccggacgaacttcatctcttttatttg
ccggcgcaaacgtaccgccagctgagggagttggcgctaagcaatgacattgcgatcgaa
gagccgatcgtgctttcggccaaccgacgccatgaagacagggcgctcgttcatcttgag
gcgcaatttcaccgacgcccgttgcttccatatggtgcaaagaccgatgccgtccatctt
tatgaggcgtccaatcgccgagcggaaatcgaagcggtcgcacgcgaaatcatccgcctt
gtccgcgatgaaggggcgcgctatcgcgacattgcgctgatcatccgccagacggaggcg
taccgcgatctggtgaaaacggtgttttttgattttgggatcccgtattttatggatgaa
aaagaaccgatgcaccaccacccgctcattgaactcgtgcgcgctgccttagagacggtc
gtgacgcgttggcgatatgaagcggtgtttcgggcggtgaaaacggatttgctttttcca
acggacggcgatctgcacatgtggcgcgaggcggccgacaagctcgaaaactatgtgctt
gcttacggaatcaaaggggataagtggacaaacaatgagcgctgggcgtatcggcgctat
caggcgcttgacggtttgaacgtaccacaaacggacgaagagcggcagtttgaggacatg
ctcaatgaatggcgcgaggcgttggccgctccgcttcgccggttggagcgccgtctgcgc
cgggcggaggacggacgcgggttttgtatggcattatatctgtttttggaagaattgcag
attccaaaaaaactagagaaaatgagcgcacaagcggaagcggacggccgcctcgttgaa
gcgcgccagcatgaacaggcgtggaacgccgtcgtcgatttgcttgaccaatatgtagaa
atgctcgggacagaatcactgccgctcgctgagtttgtcaagattatcgaggctgggctc
gatcggttggagttctcccttgtgccgccggcgatggaccaggtgatcgtcgctcagctt
gatcgctctcgtttaattgacatcaagtatgcgttcgtcatcggcgccaacgatggcgtt
attccagcaaaagtgaaggaagacgggctgatggcggaagtggagcgcgagcagctgcgt
gagttgggagtggcgctcgccccaggggggcgggagcagctgttttatgacccgtttttt
gtctacttggcacttgtttgtccgagccggcggctgtatgttacatatccgcttgctgat
ggggaagggaaagcgttgatgccgtcgccgctcatcaagcagcttacggaactgtttccg
catgcgccggtgcatctgtgcggcaacgacccgttcgacgccccggcagaaaaagcagag
gcgttcgtgaccgcgccgcgggcgacgcaaacgtatttgatcagccagctccgagcgtgg
aagcgcaactacggcatcgatccgctttggtgggatgtgtataacacgttcatcggccat
cgggactggaaggagcaggtgcggcatgccgtctccgcgctcttttatacaaacggagcg
acgccgctcaaaaaacagtggagccagcggctgtacggcaaaaaaattcaggcgagcgtc
tcgcgcatggagcagtttcaaaaatgcccgtacgcccatttcgcatcgcacgggctgcgg
ttgaaagagcgcaacgttttccgacttgaggcgccggatgttgggcaattgttccatgcc
gccatcaagcaaatcgccgaccggctgcgcgaacagcatcttgattggcgcgaactgtca
agaccagactgtgaacggctgtcggccgaggcggtcgagcgaatcgccccgctcatccag
cagcaagtgctctcaagctctcatcgctatgaatatatgaaacgaaaattgaaacacgtc
gttgcccgtacaacccatgtgttaagtgagcatgcgcgggcgagcggtttcgttccgatc
ggacttgagctgtcattcggccccaatggcgacctgccgccgcttcggtttcgactgccc
gacggaacagtgatggagcttgttgggcggatcgaccgcgtcgataaggcggaaagcagc
caaggagtgcttcttcgcattatcgattacaaatcgagcgcgaaaacgctcgatttgacg
gaagtatattacggcttggcgctgcaaatgctcacctacctggacatcgtgctgacgtat
gccgaacagctcgtcggacagccggccttgccagccggggtgctttattttcacatccac
aatccgatcgttcaagcgaagcaatgggtggatgatgaggtggaaatggcgaaaaagttg
cttgaaccgtttcggatgcgcgggctgttgctcgctgacgtcgaggcgatccggttgatg
gacggccgaacggaagacggacaatggtcgctgattgtgcccgctcagcttacgaaaagc
gggtcgatccattcgcgttcgtcggtggcgagtccatccgactttgccgcgctccgccag
catgtccgccgtttgttcatcgacatcggcgggcaaatcgccgacggcgtcgtgtcgatc
gccccgtacaagttgaaagataaaacagcgtgcgagttttgcgttttcaaaccggtctgc
caatttgatgaggcactctccggcaacgaataccggaagcttgccccgcaaacgaaggaa
gcggtcatcgaaaaactagcggaagggaaggaaggataa
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