Parageobacillus thermoglucosidasius C56-YS93: Geoth_0034
Help
Entry
Geoth_0034 CDS
T01531
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
gth
Parageobacillus thermoglucosidasius C56-YS93
Pathway
gth00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gth00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Geoth_0034
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gth01007
]
Geoth_0034
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gth03016
]
Geoth_0034
Enzymes [BR:
gth01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
Geoth_0034
Amino acid related enzymes [BR:
gth01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Geoth_0034
Transfer RNA biogenesis [BR:
gth03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Geoth_0034
Prokaryotic type
Geoth_0034
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF7121
ERM_helical
CCDC18_1st
SSNA1
SPC25_N
CEP135_TSGA10_CC
PCRF
CCDC89
GAS
ATG17_like
DUF3450
ANAPC15
CRLF3_N
KIF21A
WIT1_2_N
zf-C4H2
FapA
CCDC22_CC
L_lactis_ph-MCP
HAUS1
Motif
Other DBs
NCBI-ProteinID:
AEH46094
LinkDB
All DBs
Position
22121..23395
Genome browser
AA seq
424 aa
AA seq
DB search
MLDVKYLRNHFQEVKERIQKRGGDLANMDRFAELDKKRRELIAKAEELKNKRNEVSQQIA
VLKREKKDANHLIAEMREVGDRIKAMDDEIRQVEEELNALLLSIPNIPHESVPVGKSEED
NVEVRKWGEPRSFSFEPKPHWDIADQLGILDFERAAKVTGSRFVFYKGLGARLERALINF
MLDVHIEEFGYQEILPPYLVNRASMTGTGQLPKFEEDAFRIETEDYFLIPTAEVPVTNLH
RDEILSAEDLPIYYAAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFVKPEDSYDELE
KLTNQAERILQLLGLPYRVVCLCTGDLGFAAAKTYDIEVWLPSYGTYREISSCSNFEAFQ
ARRANIRFRREPKSKPEYVHTLNGSGLAIGRTVAAILENYQQEDGTVVIPEVLRPYMGNR
EVIR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatgtgaagtatttgcgcaatcattttcaagaagtgaaagaaagaattcaaaag
cgcggcggagatttagcgaatatggaccgttttgcagagctcgacaaaaagcgccgcgaa
ttaatcgcaaaagcagaagaactaaaaaataaaagaaatgaagtatcccaacaaatcgct
gtgttaaagcgggagaaaaaagatgccaatcatcttattgccgagatgcgggaagtaggg
gatcgcattaaagcaatggatgatgaaatccggcaagtggaagaagaattaaatgcgctg
ttattgtccattccaaacatcccgcatgaatcggtacctgtcggtaagtcggaagaagat
aatgtcgaagtccgcaaatggggagagccgcgttcattttcgtttgagccgaaaccgcac
tgggatatcgccgatcagctcggtattcttgattttgaacgggctgcgaaagtgacggga
agccgctttgtcttttataaaggacttggtgcccgcctagagcgcgcgttaattaacttt
atgcttgatgttcatatcgaagagtttggctatcaagaaatattgcctccatatcttgtt
aatcgggcgagcatgacagggacaggacaactgccaaagtttgaagaagacgcatttcgc
attgaaacagaggattactttttaattccgacggcagaagtgcctgtgaccaatttgcat
cgcgatgaaattttatcggcggaagatttgccgatttactatgctgcttacagcgcgtgt
ttccgcgccgaagccggcgctgctggacgtgatacaagagggcttattcgccagcatcaa
tttaataaagtagaacttgtgaaatttgtaaaaccggaagattcgtatgatgaattagaa
aaattgaccaatcaagcggagagaattttgcagcttcttgggcttccttatcgggttgta
tgtttatgtaccggtgatttaggatttgcggcggcgaaaacgtatgatattgaagtatgg
ctgccaagttatggaacgtatcgtgagatttcttcttgcagcaattttgaagcgttccaa
gcacggcgtgctaatattcgtttccgccgtgaaccaaaatcaaagccggaatatgtccat
acactcaacggatcaggattggccattggccgcacagtagctgccattttagaaaattac
cagcaagaggatggcaccgttgtcattccggaagtattgcgcccgtacatgggaaatcga
gaagttattcgataa
DBGET
integrated database retrieval system
