Parageobacillus thermoglucosidasius C56-YS93: Geoth_0103
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Entry
Geoth_0103 CDS
T01531
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
gth
Parageobacillus thermoglucosidasius C56-YS93
Brite
KEGG Orthology (KO) [BR:
gth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gth03400
]
Geoth_0103
DNA repair and recombination proteins [BR:
gth03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Geoth_0103
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
DUF7125
Lon_C
Rad51
AAA_22
nSTAND_NTPase5
AAA_16
AAA_24
nSTAND3
AAA
GvpD_P-loop
NTPase_1
RecA_N
AAA_14
SLFN-g3_helicase
divDNAB
Elong_Iki1
NACHT
AAA_5
ATPase_2
NPHP3_N
ABC_tran
AAA_30
AAA_18
MCM
KTI12
DAP3
ArsA_ATPase
CbiA
Motif
Other DBs
NCBI-ProteinID:
AEH46163
LinkDB
All DBs
Position
105591..106964
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AA seq
457 aa
AA seq
DB search
MGKKKTKFVCQECGYESAKWLGRCPGCNTWNSMVEEIERTKPTTKGVFVHSASDIISKPV
PITTVTATQEPRIQTGISEFNRVLGGGIVKGSLVLIGGDPGIGKSTLLLQVSAQLAALQH
KVLYISGEESVKQTKLRADRLHVASDQLYVLAETDLEYIVEAIETIHPVCVVIDSIQTIY
RADIASAPGSVSQVRECTAELMKIAKTKGITIFIVGHVTKEGAIAGPRILEHMVDTVLYF
EGERHHTYRILRAVKNRFGSTNEIGIFEMRESGLVEVENPSEVFLEERSRGAAGSTVVAA
MEGTRPVLVEIQALVSPTSFGNPRRMATGIDHNRVSLLMAVLEKRSGLLLQNQDAYLKVA
GGVKLDEPAIDLAIAVSIASSFRDQPTNPHDVIIGEVGLTGEVRRVSRIEQRVQEAVKLG
FSRMIIPKNNLAGWNPPEHITVIGVSHITEALEHTLQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaagaaaacaaagtttgtttgtcaagaatgcggttacgagtcagcgaagtgg
cttggaagatgtccgggatgcaatacatggaattcgatggttgaggaaattgagcggaca
aagccgacaacaaaaggagtgtttgtccactctgcttccgatatcatctcgaaaccagtg
ccgattactacagtgacagcaacgcaagagccgcgcatacaaacgggtatttccgagttt
aaccgcgtattaggcggagggattgtgaaaggttcgctcgtgttaatcggcggtgatccg
gggattggaaaatcgacgcttctattgcaagtttctgcgcaactggccgctttgcagcat
aaagtattatatatatccggcgaggaatcggtaaaacaaacgaaattgcgcgctgaccgc
cttcatgttgcttctgaccagctgtatgtattagcggagacagatttggaatatattgta
gaagcaatagaaaccattcaccctgtttgtgtcgtaatcgattcgatccaaacaatttac
cgcgcggatattgcctccgcacccggaagtgtctcgcaagttcgtgaatgcacagcggaa
ctgatgaaaatcgccaaaacaaaaggaatcaccatttttattgtcgggcatgtaacgaaa
gaaggagcgattgccggaccaagaattttagagcatatggtggataccgtcctttatttt
gaaggcgaacgacatcatacgtaccgcattttgcgggcggtgaaaaaccgttttggctcc
accaatgaaattggtattttcgaaatgagagaatcggggcttgttgaggtcgaaaatcca
tcagaggtgtttttagaggagcgttcccgcggcgcagcaggttcaactgtcgtcgcggca
atggaagggacccgtcctgtattagttgaaattcaagcattagtctcgccaacgagtttc
ggtaatccgcggcggatggcgacagggatcgatcataaccgtgtttctttattgatggct
gtattggaaaaaagatccggtctgcttttgcaaaatcaggacgcttatttaaaagtggca
ggaggagtaaagttagatgaaccggcgattgatttggcgattgccgtgagcattgcctca
agttttcgcgatcagcctaccaatccgcatgatgtcattattggcgaagttggtttgaca
ggagaagtgcgccgtgtttcccgtattgaacaacgggtgcaggaagctgtaaagttagga
ttttcccgcatgattattcctaaaaacaatttagccggatggaacccgccggaacatatc
accgttatcggcgtgtcccatatcaccgaagcgctggagcatacgttgcagtaa
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