Parageobacillus thermoglucosidasius C56-YS93: Geoth_0157
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Entry
Geoth_0157 CDS
T01531
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gth
Parageobacillus thermoglucosidasius C56-YS93
Pathway
gth03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gth00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Geoth_0157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gth03021
]
Geoth_0157
03400 DNA repair and recombination proteins [BR:
gth03400
]
Geoth_0157
Enzymes [BR:
gth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Geoth_0157
Transcription machinery [BR:
gth03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Geoth_0157
DNA repair and recombination proteins [BR:
gth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Geoth_0157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AEH46217
LinkDB
All DBs
Position
146359..147303
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPRIETVEISEDAKYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDG
VLHEFSTIDGVVEDVTAIILNIKKLALKIYSDEEKTLEIDAQGEGVVTAADITHDSDVEI
LNPDLHIATLAEGGRLRMRMTAKRGRGYVPAEANKREDQPIGVIPIDSIYTPVSRVAYQV
ENTRVGQVTDYDKLTIDVWTDGSIGPKEAIALGAKILTEHLNIFVSLTDEAQNAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTQKTEEDMMKVRNLGRKSLEEVK
AKLAELGLSLRKDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaattgaaaaaccgagaattgaaacggttgaaatcagcgaagatgccaaatat
ggcaaattcgtcgtcgaaccgcttgagcgtggatatggaacaactttgggtaactccttg
cgtcgtatcctattatcttcactccctggcgctgctgtgacatcggtgcaaatagatggc
gtgctgcatgagttctcaacaattgatggcgtcgtggaagatgtgacagcgatcatttta
aatataaaaaaattagcattgaaaatttattcggacgaagaaaaaacgctggaaattgat
gcacagggcgaaggggttgtcacagctgccgatattactcacgacagcgatgtggaaatt
ttaaacccagaccttcatattgctacgttagcagaaggcggccgcttacgcatgagaatg
acggcaaaacgagggcgtgggtatgttccagctgaggccaacaaacgagaagatcagcca
ataggcgttatccctatcgattcgatttacacacctgtttcacgcgttgcctatcaagtg
gaaaatacgcgtgtcggtcaagtgacggactatgataagttaacgatagatgtgtggaca
gatgggagcattggaccgaaagaagcgattgctctcggcgcaaaaattttaacggagcac
ttgaatattttcgtcagcctgacagatgaagcgcaaaatgcagaaatcatggtagaaaaa
gaggaagatcaaaaagaaaaagtgctggaaatgacgatcgaagaacttgatctttctgtc
cgttcctacaactgtttgaaacgcgctggcattaacaccgttcaggagcttacgcaaaaa
acggaagaagatatgatgaaagtgcgtaacctcggtcgcaaatctctcgaagaagtgaaa
gcaaaacttgcggaactcggtctcagtttgcgcaaagatgactag
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