Parageobacillus thermoglucosidasius C56-YS93: Geoth_1195
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Entry
Geoth_1195 CDS
T01531
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
gth
Parageobacillus thermoglucosidasius C56-YS93
Pathway
gth02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gth00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Geoth_1195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gth03021
]
Geoth_1195
Transcription machinery [BR:
gth03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Geoth_1195
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
HTH_20
DUF2408
DUF2316
Motif
Other DBs
NCBI-ProteinID:
AEH47190
LinkDB
All DBs
Position
1150612..1151745
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AA seq
377 aa
AA seq
DB search
MAEKPARAKQIDADATLEQAKEQLTELGKKRGILTYEEIAERLSAFDLDSDQMDEFYEYL
TDQGIEVISESDLESDLEHDPDIDDLAKEEFDLNDLSVPPGVKINDPVRMYLKEIGRVPL
LSAEEEIELAKRIEQGDEEAKRRLTEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKA
VEKFDYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLG
REPTPEEIAEEMDLTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEATSPSEHA
AYELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKAL
RKLRHPSRSKRLKDFLE
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaaccagctcgtgcaaaacaaatcgatgcagatgcaacgcttgaacaggcg
aaagaacaactaacagagctcggcaaaaagcgcggcattttgacatatgaagaaattgcc
gaacgtttatccgcgtttgatcttgattcagaccaaatggacgaattttacgaatactta
acggaccaaggaattgaagtcattagtgaatctgatttagaatctgatttagagcatgat
ccggatatcgacgatttagcaaaagaagaatttgacttaaatgatctgtcggttccacct
ggtgtgaaaattaacgatcctgtgcgcatgtatttaaaagaaattggtcgcgttccgcta
ttgtctgccgaagaagaaattgaactggcaaaacgaatcgagcaaggtgacgaagaagcg
aaacgccgtttaacggaagcaaaccttcgccttgtcgttagcatcgccaaacgttatgtc
ggtcgcggcatgctgtttctggacttaatccaagaaggaaatatgggtctgattaaagcg
gtcgaaaagttcgactaccgcaaaggatacaaattcagcacatatgcgacatggtggatt
cgtcaagcgataacgcgggcgattgccgaccaagcccgtacgatccgcataccggtgcat
atggtggaaacaattaacaaacttatccgcgtgcaacgtcaattgcttcaagatcttggc
cgcgaaccaactccagaagaaatcgctgaagaaatggatttaactccggaaaaagtgcgc
gaaattttaaagattgcccaagaaccagtatcacttgaaacgccgattggcgaagaagac
gattcacatttaggcgatttcattgaagaccaagaagcgacgtcgccatctgagcacgcg
gcgtacgaactgctaaaagagcagctagaagatgtgctggacacgctgacggaccgcgaa
gagaacgtgcttcgcttgcgttttggactagatgacggccgtacgcggacgctcgaagaa
gtcggaaaagtgtttggggttacccgcgaacgcatccggcaaattgaagcgaaagcgctc
cgcaagttgcgccatccaagccgcagcaaacggctgaaagactttttagagtaa
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