Parageobacillus thermoglucosidasius C56-YS93: Geoth_1203
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Entry
Geoth_1203 CDS
T01531
Name
(GenBank) endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
gth
Parageobacillus thermoglucosidasius C56-YS93
Pathway
gth03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Geoth_1203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gth03400
]
Geoth_1203
Enzymes [BR:
gth01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Geoth_1203
DNA repair and recombination proteins [BR:
gth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Geoth_1203
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AEH47198
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All DBs
Position
1157906..1158802
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AA seq
298 aa
AA seq
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MLKIGSHVSMSGKKMLLAASEEAVSYGANTFMIYTGAPQNTKRKKIEELNIEAGLAHMKE
HGIEEIVVHAPYIINIGNTKNPDTFALGVEFLRSEIERTEAIGAKQIVLHPGAHVGAGPE
AGIRKIIEGLNEVLTREQTVQIALETMAGKGSECGRSFEELAEIIDGVTHNEKLSVCFDT
CHTHDAGYNIIDDFDGVLQEFDRIIGLDRLKVLHINDSKNPRGSRKDRHENIGFGHIGFA
ALNYIVHHPQLADIPKILETPYVGEDKNNKKPPYKHEIAMLRAQTFDEELLTKIMNEE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaatcggctcgcatgtatcgatgagcgggaaaaagatgctgcttgctgcaagc
gaagaagctgtttcctacggggcaaatacgtttatgatttacacgggcgccccgcaaaac
acaaagcgcaaaaaaattgaagagctgaacattgaagcggggcttgcccatatgaaagaa
cacggcattgaagaaatcgtcgtgcatgctccgtatatcattaatatcggcaatacgaaa
aatccggatacgttcgccctcggcgtggaatttttgcgttcggaaatcgagcggacggag
gcgattggcgcgaagcaaatcgttctccatcctggcgcgcatgtcggggcggggccggaa
gcgggaatccgcaaaattattgaagggttgaatgaagtgctgacgcgcgaacaaacggtg
caaattgcgttagaaacgatggcgggaaaaggttcggaatgcgggcgcagctttgaggag
ctcgccgaaattattgatggcgtcacccataacgagaaattgtctgtttgttttgacacg
tgccatacacatgatgccggctataacatcatcgatgattttgacggcgttttgcaagaa
tttgatcggatcatcggtttagaccggcttaaagtgctgcatattaacgatagcaaaaat
ccgcgcggaagccggaaagaccgacacgaaaacatcggtttcgggcatatcggctttgct
gcgttaaactacatcgttcatcatccgcagcttgccgatattccgaaaattttagagaca
ccgtatgtcggagaggataaaaacaataaaaagccgccgtacaagcacgaaattgccatg
ctgcgcgcgcaaacattcgatgaagagttgttgacgaaaatcatgaacgaagaataa
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