Parageobacillus thermoglucosidasius C56-YS93: Geoth_2605
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Entry
Geoth_2605 CDS
T01531
Name
(GenBank) DNA mismatch repair protein mutS
KO
K03555
DNA mismatch repair protein MutS
Organism
gth
Parageobacillus thermoglucosidasius C56-YS93
Pathway
gth03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Geoth_2605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gth03400
]
Geoth_2605
DNA repair and recombination proteins [BR:
gth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Geoth_2605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_14
nSTAND_NTPase5
nSTAND3
14-3-3
NACHT
AAA_27
BORCS6
Rad17
AAA_29
Nop16
Motif
Other DBs
NCBI-ProteinID:
AEH48494
LinkDB
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Position
complement(2535341..2537935)
Genome browser
AA seq
864 aa
AA seq
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MAKYTPMIQQYLDIKAQYPDAFLFFRLGDFYEMFFDDAIKAAQELEITLTSRDGGGDERV
PMCGVPYHSAQGYIEQLISKGYKVAICEQVEDPKTAKGVVRREVVQLITPGTVMEGRGLL
EKENNYLATVTLFADGTYGFAYTDLSTGENRITILASFEDVMNELYAIGTKEIVLASDFP
SDEQQLLKERYGVTISYEDGTEMPEGFATIAGGLAQNKLQITFARLLHYIIRTQKRRLDH
MQPVQVYQVDHYMKIDLYSKRNLELTETIRSKGRKGSLLWLLDETVTAMGGRLLKQWLDR
PLLDRGQIERRLHMVETLIHHYFERQELRERLREVYDVERLAGRVAYGNVNARDLIQLKK
SLQQIPALKDIVAKLADNQAQQLADKLDPCSELVDLLERSIQENPPLSVKEGNIIKDGYN
ETLDRFRDASRNGKSWIAQLESKERELTGIKSLKIGYNRVFGYYIEVTKPNLHLLPKGRY
ERKQTLANAERFITQELKEKEALILEAEEKSIELEYELFVDIRERVKQYIPRLQSLAKAI
SELDVLQSFATVSEERHYVKPQFSEHRELVIQAGRHPVVEKVLGTQTYVPNDCYMNKERE
LLLITGPNMSGKSTYMRQIALTAIMAQIGCFVPADKAVLPIFDQVFTRIGAADDLVSGQS
TFMVEMLEARNAIVHATQNSLILFDEIGRGTSTYDGMALAQAIIEYIHDHIGAKTLFSTH
YHELTDLEQSLPKLKNVHVSAVEENGKVVFLHKIEEGPADQSYGIHVAELAGLPSSLIRR
AEEILAELEQQEEQRKEEQEEPGGKNEAVFEQLSMFAEEKPSKEETRLSKKEKKALETLK
SVNLLEMTPLEALNKLYEIQKLLK
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatatacgccaatgattcagcaatatttagacattaaggcacaatatccagat
gcctttttattttttcgtcttggcgatttttacgaaatgttttttgacgatgcaatcaaa
gcggcgcaggaactggaaattacgttgacaagccgcgatggcggcggcgacgagcgggtg
ccgatgtgcggtgttccgtatcattccgcgcaagggtatattgaacaattgatttcgaaa
ggatataaagtggcgatttgcgagcaagtcgaagatccgaagacagcaaaaggtgtcgtc
cgccgcgaagtcgtccagctcataactcccggaacggtgatggaagggagagggcttctg
gaaaaagaaaacaactatttggcgacggtgacgctgtttgccgatggcacgtacggtttt
gcttatacggatttatcaacaggggaaaaccgcatcacgattcttgcctcctttgaagat
gtaatgaatgaactgtatgcgattgggacaaaagaaattgtccttgccagcgattttcca
agcgacgaacaacaactactgaaagaacggtatggggtgacgatctcatacgaagacgga
acggaaatgccggaaggatttgcgacgattgccggcgggcttgcgcagaacaagctgcaa
atcacgtttgcccgccttcttcattacatcatccgtacgcaaaaacggcgccttgatcat
atgcagcctgtgcaagtgtatcaagtcgaccactatatgaaaatcgatttgtattcgaag
cgaaatctggaattaaccgagacgatccgttccaaagggcggaaaggttcgctcttatgg
ctgcttgatgaaacggtgacagcgatgggcggacgattgctgaagcaatggctcgaccgc
ccgcttttggaccgcggacaaattgaacggcgcttgcatatggttgaaacattgattcat
cactatttcgagcgccaagagctgcgcgaacgcctccgtgaagtgtatgacgtcgagcgc
cttgccggccgcgtcgcctacggaaacgtaaatgcgcgcgatttaattcagctcaaaaaa
tcgctgcagcaaattccggcgttaaaagatattgtcgcaaagcttgccgataaccaagcg
cagcagcttgccgacaaacttgacccgtgttcggagcttgtcgatctgttggagcggtcg
attcaagaaaatccgccattatctgttaaagaaggcaacatcattaaagacgggtataat
gagacgctcgaccgtttccgtgatgcaagccgcaacggaaaatcatggattgcccaatta
gaaagcaaagagcgggagctaaccggaattaaatcgttgaaaatcgggtataatcgcgtg
tttggctattacattgaggtgacaaaaccaaaccttcatttattgccgaaagggcgctat
gagcggaaacagacgcttgccaacgccgagcgttttattacccaggaattaaaagaaaaa
gaagcgctcattttagaagcggaagaaaaaagcattgaattagaatacgaattgtttgtc
gacatccgtgaacgcgtcaaacaatatattccgcgtctgcaatcattggcgaaagcaatc
agcgagcttgatgtgttgcaatcgtttgcgactgtcagcgaagaacgccattatgtgaaa
ccgcagttttccgagcaccgggaacttgtcattcaagcgggccgccatcctgtagtggaa
aaagtgcttgggacgcaaacatatgtaccgaacgattgttatatgaataaagagcgggaa
ctgttgctgattacagggccgaatatgtccggaaaaagcacgtacatgcggcaaattgcc
ctaactgccatcatggcgcaaatcggctgttttgtgccagcagataaagcagtgctcccg
atttttgaccaagtgtttacgagaatcggcgctgcggatgatttagtgtcagggcaaagc
acgtttatggtggaaatgcttgaggcgcgcaacgcgatcgttcacgcgacgcaaaacagc
cttattttgttcgatgaaatcgggcgcggcacgtccacgtacgatgggatggcgctagcg
caggcgatcatcgaatacattcatgaccatattggcgcaaaaacgttgtttagcacgcat
tatcacgaattaacggatctggagcaatcgctgccgaagctgaagaacgtccatgtaagc
gccgtcgaggaaaacggaaaagtcgtgtttcttcataaaattgaagaaggcccggctgac
caaagctatggtattcatgtcgccgaacttgccggcctcccttcctccctcattcgacgc
gctgaggaaattttagcggagctggagcagcaagaagagcagcgaaaagaagaacaagaa
gaaccgggcggcaaaaatgaagcggtcttcgaacaacttagcatgttcgccgaagaaaag
ccttctaaagaagaaacccgtctatcgaaaaaagaaaaaaaggcgcttgaaacgctgaag
tccgtcaatttactggaaatgacaccgcttgaagcgttaaataaattatacgaaattcaa
aaactgttaaagtaa
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