Parageobacillus thermoglucosidasius C56-YS93: Geoth_2611
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Entry
Geoth_2611 CDS
T01531
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
gth
Parageobacillus thermoglucosidasius C56-YS93
Brite
KEGG Orthology (KO) [BR:
gth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gth03016
]
Geoth_2611
Enzymes [BR:
gth01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Geoth_2611
Transfer RNA biogenesis [BR:
gth03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Geoth_2611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AEH48500
LinkDB
All DBs
Position
complement(2545392..2546963)
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AA seq
523 aa
AA seq
DB search
MNEKQRLEQTGHIQTMDHPTDKKSALDALKKKTSKDYEKYFTSVFIPPNLKEAKKRGKEE
VKYYKDFTIPEQFRGMGNGRKFYIRTYGCQMNEHDTEVMAGIFMELGYEPTDRPEDANVI
LLNTCAIRENAENKVFGEIGHLKQLKQDNPDLLLGVCGCMSQEESVVNKILKQYQYVDMI
FGTHNIHRLPHILHEAYMSKEMVVEVWSKEGDVIENLPKARKGNIKAWVNIMYGCDKFCT
YCIVPYTRGKERSRRPEDIIQEVRHLAAQGYKEVTLLGQNVNAYGKDFTDMKYGLGDLMD
ELRKIDIARIRFTTSHPRDFDDRLIEVLAKRGNLVEHIHLPVQSGSTEILKLMGRKYTRE
EYLELVRKIKAAIPDVALTTDIIVGFPNETEEQFEETLSLYREVEFDSAYTFIYSPREGT
PAAKMVDNVPMEVKKERLHRLNALVNEISARKMKEYEGKVVEVLVEGESKNNPDVLAGYT
RKNKLVNFIGPKSAIGKLVKVRITEAKTWTLNGEMVEEAIEVR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaaacaacgtctagaacaaacagggcacattcaaacaatggatcatccaacg
gacaaaaaatccgctttggatgcgctaaagaaaaaaacgagcaaagattacgaaaagtat
tttacgagcgtatttattccgccaaatctgaaagaagcgaaaaagcgcggaaaagaagaa
gtgaaatattataaagatttcacgatcccggaacaattccgcggcatgggcaacggccgc
aagttttatattcgcacgtacggctgccaaatgaacgaacatgacacagaagtcatggcg
ggaatttttatggagcttggatatgagccgactgaccgcccagaagatgcgaatgtcatt
ttattgaatacatgcgccatccgcgagaatgccgaaaacaaagtatttggcgagatcggc
cacttaaagcagctgaagcaagacaatccggatttgcttcttggggtatgcggctgtatg
tcgcaagaagaatcggtcgtcaataaaattttaaaacaatatcaatatgttgatatgatt
ttcggtacacataacatccatcgcctgccacacattttgcatgaagcatatatgtccaaa
gaaatggttgtcgaagtatggtcgaaagaaggcgatgtcatcgaaaatcttccgaaagcg
cgcaaaggcaacatcaaggcatgggtcaacattatgtatggctgcgacaaattttgcacg
tattgcattgttccgtatacgcgcggaaaagaacggagccgccgtccggaagacattatc
caagaagtgcgccatcttgccgcccaaggatataaagaagtgacgcttctcggccaaaac
gtcaatgcctacggaaaagatttcacggatatgaaatacggccttggcgatttgatggac
gaacttcgaaaaattgatattgcgcgcatccgttttacgacaagccatccgcgcgatttt
gacgaccgtttaatcgaagtgctcgccaaacgcggcaatttagtggaacatattcatttg
ccggtgcaatcgggcagcacggaaatattgaaattgatgggccgcaaatatacacgcgag
gaatatttagagcttgtccgcaaaattaaagcggcgattcctgacgttgccttgacgacg
gacattattgtcggattcccgaacgaaacggaagaacaatttgaagagacgctgtcgtta
taccgcgaggtcgaatttgattctgcgtatacgtttatttattcgccgcgcgaaggcacg
ccagcagcgaaaatggtggacaatgtgccgatggaagtgaaaaaagaacggttgcaccgg
ttgaacgcgcttgtcaatgaaatttcggcaagaaaaatgaaggaatatgaagggaaagtt
gtcgaagtattagtagagggagaaagcaaaaacaacccggatgtccttgctggatacacc
cggaaaaacaaacttgtcaactttatcggtccgaagtcggcgattggcaaactggtgaaa
gtgcggattaccgaggcgaaaacgtggacattaaacggggaaatggtagaagaagcgatc
gaggtgagataa
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