Parageobacillus thermoglucosidasius C56-YS93: Geoth_2650
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Entry
Geoth_2650 CDS
T01531
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
gth
Parageobacillus thermoglucosidasius C56-YS93
Pathway
gth03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Geoth_2650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gth03019
]
Geoth_2650
03016 Transfer RNA biogenesis [BR:
gth03016
]
Geoth_2650
Enzymes [BR:
gth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Geoth_2650
Messenger RNA biogenesis [BR:
gth03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Geoth_2650
Transfer RNA biogenesis [BR:
gth03016
]
Prokaryotic type
tRNA degradation factors
Geoth_2650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
ATP-grasp
SPATA25
KorB
OB_RRP5_4th
S1_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AEH48538
LinkDB
All DBs
Position
complement(2586675..2588813)
Genome browser
AA seq
712 aa
AA seq
DB search
MEQEKRVFSIDWAGRPLVVEIGELAKQANGAVLVRYGDTVVLSTATASKEAKNVDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFSEGFRNEVQIVSMVMSV
DQDCSPEMAALLGSSLALTISDIPFEGPIAGVTVGRVDGKFVINPTVEQSEKSDIHLVVA
GTKDAINMVEAGADEVPEEIMLEAIMFGHEDIKRLIAFQEEIAAQVGKEKMEVVLYELDP
QLEAKIRQLAEADIKRAVQVPEKLARDAAIEEVKAGVIAKYEEQEADEETLKQVNEILHK
LVKEEVRRLITEEKIRPDGRKVDEIRPLSSAVGVLPRTHGSGLFTRGQTQVLSVCTLGAL
GDVQILDGLGIEETKRFMHHYNFPPFSVGETGPMRGPGRREIGHGALGERALEPVVPSEK
EFPYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLVKNDDHYTILT
DIQGIEDHLGDMDFKVAGTRKGVTALQMDIKIKGLTREILEEALLQARKGRMEILDHMMQ
TIREPRKELSKYAPKILTMQINPDKIREVIGPSGKQINKIIDETGVKIDIEQDGTIFISS
VNEAMNEKAKQIIEDIVREVEVGQIYLGKVKRIEKFGAFVELFNGKDGLVHISELAEERV
GRVEDVVSIGDEILVKVMEIDKQGRVNLSRKAVLREQKERRGRRPERHRMKP
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagaaaaacgcgttttttccatagactgggctggacggccgctcgttgtcgaa
attggcgagttggccaagcaggcaaacggagcggtattagtccgttacggtgacacggta
gtattaagcacagcaacggcgtccaaagaggcgaaaaacgtcgactttttcccgctgacg
gtcaactatgaggagcgtctttatgcagttggcaaaattccgggaggatttattaagcgg
gaagggcgtcctagcgaaaaggcgattttggcaagccgcttgattgaccggccgattcgg
ccattgttttcggaaggattccgcaatgaggtgcaaattgtttcgatggtgatgagcgtc
gatcaagactgctctccggaaatggcggcattgctcggctcctccctagcgctgacgatt
tccgatattccgtttgaagggccaattgccggcgtgactgtcggacgtgtcgatggaaag
tttgtcattaatccgacggtcgaacagtcggaaaaaagcgatatacatctcgttgtcgcc
ggaacgaaagacgcgattaacatggtcgaggctggagccgatgaagtgccagaggagatc
atgttagaagcgattatgttcgggcatgaagatataaaacggctgatcgcttttcaagag
gaaatcgccgcccaagtcggcaaagaaaaaatggaagttgttttgtatgaactcgatccg
cagctggaagcgaaaatccgccagcttgccgaagcggatattaaacgggcggtgcaagtg
ccggaaaaattggcgcgcgatgcggcgattgaggaagttaaagcaggtgtcattgcgaaa
tatgaagaacaggaagcggacgaggaaacgttgaaacaagtgaatgaaattttacataag
ctcgtcaaggaggaagtaagacggcttattaccgaagaaaaaattcgcccagacggccgg
aaagtggatgaaatccgtccgctctcctcagcagtcggcgtcctgccgcgcacgcacggc
tcaggcttgtttacgcgcgggcagacacaagtgctcagcgtttgcacattaggggcgctt
ggcgatgtgcaaatactggacgggctcggtattgaagaaacgaaacggtttatgcaccat
tacaacttcccgccgttttccgtcggcgaaacagggccgatgcgcgggccgggacgccgc
gagatcgggcacggcgcgcttggcgagcgggcgctcgaaccggtcgttccgtcggaaaaa
gagtttccgtatacgatccgcctcgtgtcagaagtgcttgaatcgaacggttccacatca
caagcaagcatttgcgcaagcacgctggcgatgatggacgcaggcgtgccgattaaggcg
ccggtagcgggaattgccatggggcttgtgaaaaacgatgatcattatacgattttaact
gacattcaaggaatcgaagaccaccttggcgatatggactttaaagtggccggcacgaga
aaaggcgtcaccgctttgcagatggatatcaaaatcaaagggttaacccgcgaaattttg
gaggaagcgttgctgcaagcaagaaaaggccggatggaaattttggaccatatgatgcaa
acgatccgcgagccgcgcaaagagctgtcgaaatacgcgccaaaaattttaacgatgcaa
attaatccagataaaatccgcgaagtcattgggccgagcggcaaacaaattaataaaatt
attgacgaaaccggcgtgaaaatcgatattgaacaagacggaacaatttttatctcatcc
gtcaatgaagcgatgaatgaaaaagcgaagcaaattattgaagatatcgtccgcgaagtc
gaagtcgggcaaatttatttaggaaaagtgaagcgcattgagaaattcggcgcatttgtt
gaattgttcaacggcaaagacgggcttgttcatatttccgaattggcggaagaacgtgtg
ggaagagtcgaagacgtcgtttcaatcggcgatgaaattttagtaaaagtgatggagatt
gataaacaaggacgcgttaatttatcgcggaaagcggtattgcgcgagcaaaaagaaaga
agaggaagacggccggaacggcacagaatgaagccttag
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