Parageobacillus thermoglucosidasius C56-YS93: Geoth_2654
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Entry
Geoth_2654 CDS
T01531
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gth
Parageobacillus thermoglucosidasius C56-YS93
Brite
KEGG Orthology (KO) [BR:
gth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gth03016
]
Geoth_2654
Enzymes [BR:
gth01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Geoth_2654
Transfer RNA biogenesis [BR:
gth03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Geoth_2654
Prokaryotic type
Geoth_2654
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AEH48542
LinkDB
All DBs
Position
complement(2590346..2591254)
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AA seq
302 aa
AA seq
DB search
MDGVLLLHKPPGMTSHDCVARIRRMLRTKKVGHTGTLDPNVSGVLPICIGKATRIAEFLT
GSTKTYEGEVTLGIATTTEDSDGEIVAKQKVDRIIHRSDIEEVFRQLTGEIAQTPPMYSA
VKVNGKKLYEYARAGVEVERPTRIVTIHELTLLEERDTFSGDTVSFRFRVVCSKGTYVRT
LAVMIGERLGYPAHMSDLVRTASGPFSLQDCVTFEQLERYIENGQVQSVLLPIEKALFHL
PKYEINDKVAEKVKNGAILPLPAFLQSLQGPVLMMTKQSEALALYIKHPAKPHLMKPLKV
FR
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggacggagtattgttattgcacaaaccgccgggaatgacatcgcacgattgtgttgcg
cgcattcgccgcatgttgcggaccaaaaaagtaggccatacagggacgcttgacccaaac
gtatcaggagttttgccaatttgtattggaaaggcgacgcgcatcgccgaatttttaaca
ggatcgacgaaaacatacgaaggtgaagtgacattagggatcgcgacaacaacagaagac
agcgatggcgaaatcgtcgcaaagcaaaaagtggaccgcatcattcatcgcagtgacatc
gaagaagtgttccggcagttgacgggggaaattgcgcaaacgccgccaatgtactccgcg
gtaaaagtgaacggaaaaaaactgtatgaatatgcgcgcgcgggcgttgaagtcgagcgg
ccgactcgcattgtcacgatccatgaactaacattgctggaggaacgagacacgttttct
ggtgacaccgtttcatttcgctttcgtgtcgtttgcagcaaaggcacctacgttcgcacg
ttagcggtaatgatcggcgaacgccttggctatccggcgcatatgtctgaccttgttcgc
acggcatccggtcccttttctttgcaagattgtgtcacatttgagcaattggaacgttac
atcgagaacgggcaagtacaatccgttttgcttccgatcgaaaaagcgctttttcatttg
ccgaaatatgaaataaatgataaagtagcggagaaagtaaaaaacggagcgatattgccg
cttcccgcgtttttgcaatcattgcaaggtccggtattaatgatgaccaaacaaagcgag
gcgctcgctctttatataaagcatcctgctaaacctcacttgatgaagccgctgaaagta
ttccgataa
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