Parageobacillus thermoglucosidasius C56-YS93: Geoth_3144
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Entry
Geoth_3144 CDS
T01531
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
gth
Parageobacillus thermoglucosidasius C56-YS93
Brite
KEGG Orthology (KO) [BR:
gth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gth03400
]
Geoth_3144
DNA repair and recombination proteins [BR:
gth03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Geoth_3144
Archaeal homologous recombinant proteins
Geoth_3144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_29
AAA_23
AAA_21
APG6_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AEH49018
LinkDB
All DBs
Position
complement(3058254..3061607)
Genome browser
AA seq
1117 aa
AA seq
DB search
MKPISLTIAGLHSFREKQTIDFQSLCEGGVFGIFGPTGSGKSTILDAMTLALFGSVERAP
NNTHGIMNHAENELFVSFTFELENASCTKRYTVERSFKRGDEWRLKSGICRLIEVGAENV
VLADKSTEVNKAVEQLLGLTMKDFTRAVVLPQGKFAEFLSLKGAERRQMLQRLFHLEPYG
DKLNKKLKEKLAAISSELNEVIAEKTGLGDASKEAVERAKQELDMFRELLQKWKAELHDM
ERKIERNKQLWAWQTEKKELEAELARLSAEEPHIRALENKKERAEQAERMWPYLERYEEA
RRFVANAQQKQHELRQKLAQAAALHEKAMRHYEHIRQEKAASEPRLLAKKEQLTQAKQLA
AQIRSLEAELNEMEKQIREVEGEERKKRELWQEAAALYERGIEKQQMLKTELQKHLASIE
QKEVIEQAYDEKQQIERIADALQHIQQRLAQKQQAQQQASEEAEKRKRQAETANEKLRLL
FQKIEKIYHSVCERQWQLEKLIYRYEQHLEQEREKAEQAKTAEMAAVLAKQLRQGEPCPV
CGSCEHPNPYVYEHHDGGSDEKIAMFEQQVKHGQSYMQMLHALKAQLEQMAQFIGNEWTF
QRLDVSKWKVEEDIDIAVEVKALQQDCLQLKEAVQQALQKWRDAESAQQAIEQEMRLLEK
DIRELQTEWQIRLREYNQLQASWREKYADFSFTEIEVIRDQMRRREETVRQLQKRIDDSI
PFLDKKLSEKEQLAQQLQEIETEKVRLVSLHKAKQQQIDSYKQQLLEKAGTVQMEEQLLH
IEQQLLHLKSGEEQAYQRWLQAQKQYQTLDAEAKAIQQSLEEGKAQYEEARSRWLRELEK
TAFADENEVKEAKAAEEKRSEWEQQINDYWQKVQHAQHRLEQLAEAMGGETIDQQQWEQL
QAVYEEVKQQVDGTMQQVGAAQNKVEELTEKHKRFVELEKKQQELTALADRYKHLQSILK
GNSFVEFLAEEQLIQVTRMASERLSSLTRQRYSLEIDSQGGFLIRDDANGGVKRPVTTLS
GGETFLTSLSLALALSAQIQLRGEYPLRFFFLDEGFGTLDAELLDTVISALEKLHSQRLS
VGVISHVQEIRARLPKRLIVEPAEPAGRGTRVRLEVM
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
gtgaagccgatttcgttaacgatagctggtttgcacagtttccgcgaaaaacaaacgatt
gatttccaatcgctgtgcgaaggcggcgttttcggtattttcggtccaacaggaagcgga
aaatcaacgattttagacgcgatgacacttgcgctatttggcagtgtggagcgcgcgcca
aacaatacgcatgggattatgaatcatgcggaaaacgagctgttcgtttcttttacgttt
gaattagaaaacgcttcatgcacgaagcgctatacggtggagcgcagctttaaacgcggc
gatgaatggcggttaaaaagcggcatatgccggctgatcgaagttggcgccgaaaatgtg
gtgctggcggataaatcgacagaagtcaataaagcagtagagcaattgcttggtttgaca
atgaaagattttacgcgcgctgttgtgttgccgcaaggaaaattcgcagaatttttgtca
ttgaagggcgccgaacgccggcagatgctgcagcgcctttttcatttagagccgtatggc
gataagctgaacaaaaaattaaaagagaaacttgccgccatttctagcgagttaaatgaa
gtgatcgctgagaagacggggttaggagacgcctcgaaagaagcggtcgagcgggccaaa
caagaattggacatgttccgggagttattacaaaagtggaaagcagaattgcatgatatg
gaaagaaaaatcgaacgaaataagcagttatgggcatggcaaacggaaaaaaaggaactc
gaagcggaactggcgcgcctttccgcggaagaaccgcatattcgcgcattggaaaataaa
aaagaacgcgcggaacaagcggaacgaatgtggccatatcttgagcggtatgaggaagcg
cgccgatttgttgccaatgcgcagcaaaaacagcacgaattgcggcaaaagctcgcccag
gccgcagcgctgcatgaaaaagcgatgcgccattatgagcatattcgccaagaaaaagcc
gcttccgagcctcgcttgttggcaaaaaaagaacagttaacccaagcgaaacagttggcg
gcgcaaatccgttcccttgaagcggaactaaatgaaatggaaaaacaaatccgcgaggtg
gaaggagaagaacggaaaaaacgcgagctgtggcaggaagcggccgcattatatgaacgc
gggatcgaaaaacaacagatgctgaaaacagaattgcaaaagcatttagcttctatagag
cagaaggaagtgattgaacaggcatatgatgaaaaacaacaaatcgaaagaatagcagat
gcgctccaacatattcagcagcggttggcgcaaaaacagcaagcgcagcagcaagcaagc
gaagaagcggaaaaacggaaacggcaagccgaaacggcaaacgaaaaattgcgcctttta
tttcaaaagatagaaaaaatctatcattctgtttgtgagcggcaatggcagcttgaaaaa
ctcatctatcggtatgagcaacatttggaacaagaacgggaaaaagcggaacaggcgaaa
actgcggagatggcagcagtgcttgctaaacagcttcgccaaggagaaccgtgccctgtt
tgcgggtcatgcgagcatccgaatccgtatgtatatgagcaccatgacggcggcagcgac
gaaaagatcgccatgtttgaacagcaagtaaaacatggtcaatcttatatgcaaatgctg
catgcgctaaaagcacagctggagcagatggcgcaatttattgggaatgagtggacgttt
caacggttggacgtaagtaaatggaaagtagaagaagatatcgatattgccgtggaagtg
aaggcgctccagcaagattgtttacagttaaaagaagccgttcagcaggcgctgcaaaaa
tggcgcgatgccgaatcggcgcaacaagcgatcgaacaagaaatgagattgcttgagaaa
gatatacgagagctgcaaacggaatggcagattcgtttgcgcgaatacaaccaattacaa
gcaagctggcgcgaaaaatatgccgacttttcttttactgagatcgaagtgatccgcgac
caaatgcggagacgcgaagaaaccgtccgacagttgcaaaaacggattgatgacagcatc
ccgtttctcgacaaaaaattaagcgaaaaagaacaattggcccagcaattgcaggagata
gaaacagaaaaagtccgcctcgtttcgttgcacaaagctaaacagcagcagatcgacagc
tataaacaacaattgttagaaaaagcaggaacggtacaaatggaagagcaacttctgcac
atcgagcagcagttgcttcatttaaaaagcggggaagaacaagcctatcaacgatggctg
caggcgcaaaaacagtatcaaacgttggatgcagaggcgaaagcgatacagcagtcattg
gaagaaggaaaagcgcagtatgaagaagcgagatcgcgttggctgcgggaattggaaaaa
acggcgtttgccgatgaaaacgaagtgaaagaagcaaaggcagcagaggaaaaacggtcc
gagtgggagcagcaaatcaacgattattggcagaaagtgcaacatgcccagcaccgcctt
gagcagcttgctgaagcgatgggcggcgaaacgattgaccaacaacaatgggaacaattg
caggctgtgtacgaagaagtgaaacaacaggtagacggcacgatgcagcaagttggcgcc
gcgcaaaataaagtggaagaattgacggaaaaacataaacgttttgtagaattagagaaa
aaacagcaagagctgaccgctcttgcggaccgttataaacatttgcagtcgattttaaaa
ggcaacagctttgtcgaatttttggcggaagaacagctcattcaagtgacgagaatggct
tccgagcggttaagctcgttgacgagacagcgctattcgctggaaatcgactcgcaagga
ggctttctcattcgcgatgatgccaatggcggggttaagcggccagtgaccacattatca
ggcggggaaacgtttttaacgtcattgtcgcttgccttggcgctgtcggcgcaaattcag
ctgcgcggggaatatccgcttcgatttttctttttggatgaaggatttggcacattggat
gcggaacttcttgatacggttatttctgcactggaaaaacttcattcgcagcggctgtct
gtcggagtaatcagccatgtgcaagaaatccgcgcccgcttgccgaaacggcttattgtt
gagccggcggagccggctgggcggggaacgagagtcaggttagaagtgatgtag
DBGET
integrated database retrieval system
