Parageobacillus thermoglucosidasius C56-YS93: Geoth_3146
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Entry
Geoth_3146 CDS
T01531
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
gth
Parageobacillus thermoglucosidasius C56-YS93
Brite
KEGG Orthology (KO) [BR:
gth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gth03400
]
Geoth_3146
Enzymes [BR:
gth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Geoth_3146
DNA repair and recombination proteins [BR:
gth03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Geoth_3146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
ResIII
AAA_12
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEH49020
LinkDB
All DBs
Position
complement(3062849..3066565)
Genome browser
AA seq
1238 aa
AA seq
DB search
MSNVFRPKTKESQWTDEQWKAIVADGRDILVAAAAGSGKTAVLVERIIQKITAKEDPVDV
DRLLVVTFTNASASEMKTRIAEAIERELDKQPNSLHLRRQLSLLNRASISTIHSFCLDVV
RKYYYLIDIDPVFRIADDTEAELLKEEVMEELLEEEYGKADNEPFFDIVDRYTGDRSDAE
LQEMILAIHEFSQSHPEPCKWLDQLVAMYDVDENDRLEEIPYISWMKRYVKMELDAAKRL
VSKALQLANLPGGPLPRAENYRDDLRIIAHLETLLERSWDELYEAFQSLSLSRLKSCRGD
EYDPQLLEEANSLRDQAKKKLESLRDNVFSLRPATWLHHMREMKPIVETIVRLVKRFAEM
FQARKREKGIVDFSDLEHYCLQILRHPDSADGQWLPSDAALDYRAQFIEVLVDEYQDTNM
VQEAILQLVAKGGNLFMVGDVKQSIYRFRLAEPLLFLSKYKRFTADGTHPGMKIDLSNNF
RSRAEVLHGTNFIFKQIMGETVGEIEYDETAELKYGAVDYPDSEHAAPELIVIDRNSEEG
EESGELDANDLAAAQLEARMMAKKIKEIVSEPLHVFDRKAKRMRRAMYRDIVILLRSMTA
APQIMEEFRAQGIPVYADLSSGYFQATEIAVMLSLLKVIDNPYQDIPLASVLRSPIVGLN
ENELALIRIHEKKGTFYEAMMSFLHKAADNKEEEMLQQKLRLFSEQLHQWRTMARQRSLA
DVIWQLYRDTHFYDFVGGLPGGKQRQANLRALYDRARQYEATSFRGLFRFLRFIERLQER
GDDLGAARALGEQEDVVRIMTIHSSKGLEFPIVFVAGLARPFNTRDLYGSYLLDKELGFA
ARFVDPKLRISYPTLPQIAIRQKKRLDYLAEEMRILYVALTRAKEKLYLVAAVKDAQKEI
DKWKSTAAEEEWLLPDDVRAAARCYLDWIGRALIRHRDGQRLGDLSHVCREVASHPSVWR
ITIVPARELHDANQETERLDEQIATALKRGERVPTGGYAEEVQRLLSWKYAYEKETLVRA
KQAVSELKRHREIFGENADIMLLHSFSTPLFERPMFMREKTLTPAEKGTAMHIVMRHVDL
TVPITEEAVREQIAKLVQMELLTHEQAEAVNVSSIVAFFDTEIGKRLRTASEVHREIPFS
LALPAKEVYGDGVGKEGNILVQGVIDCLFADEKGLVLIDFKTDAVNRFAGGWREAKQVML
SRYQTQMQLYRRAVEQIWKMNVDECYLYLFDGSHLLPI
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgtttttcgtccgaagacgaaggaaagtcagtggacggatgaacaatggaag
gctattgtggcggacggacgcgacattttagtagcagcagcggcgggatcgggaaaaacg
gcagtgcttgtcgaacggatcatccaaaaaattacagcgaaagaagacccggtggatgtc
gacaggcttcttgtcgtgacgtttacaaacgcttctgcgtcggaaatgaaaacgagaatt
gcagaagcgatcgagcgcgagctggacaaacagccaaactcgcttcatttgcggagacag
cttagtctgttgaaccgcgcttcgatttccacgattcactcgttttgtttggatgtcgtt
cgcaaatattactatttgatcgatatcgatcccgtatttcgcattgctgatgacacggaa
gcggaattgctgaaagaagaagtgatggaggaactgctcgaagaagaatatggaaaagca
gacaacgagccgttttttgacattgtggaccgctatacaggagaccggagcgacgccgag
ctgcaagaaatgattttagccatccatgagttttcccaatctcatcctgaaccatgcaaa
tggcttgatcagcttgtcgcaatgtatgatgttgatgaaaatgaccgattagaggaaatt
ccatatatttcttggatgaaaaggtatgtaaagatggaattggacgcggcgaaacgcctt
gtttcaaaggcgctgcagctcgcgaatttgcctgggggcccgctgccgcgcgccgaaaat
taccgcgatgatttgcggatcattgcccatttggaaacgttgttggaacgctcatgggac
gagctgtatgaagcgtttcagtcattatcgctatcacgtttaaaatcgtgccgcggtgat
gaatatgacccgcagctgctcgaagaagccaattcattgcgcgatcaagcgaaaaagaaa
ttagaatcgttgcgcgacaatgtgttttcgctccggccggctacgtggcttcaccatatg
cgggaaatgaaaccaattgttgaaacgattgttcggctcgtaaaacggtttgcggaaatg
tttcaagcgcgtaaacgcgaaaaaggaatcgttgatttttctgatttggaacattattgt
ttgcaaattttgcgccatcctgattctgctgacgggcaatggcttccatctgatgccgct
ttggattatcgtgcccaatttatcgaagtgcttgtcgatgagtatcaagatacgaacatg
gtgcaagaagcgatattgcagcttgtggcaaaaggcggaaatttgtttatggtgggtgat
gttaagcaatccatttaccgcttccgcttggcggaaccgctgttatttttaagcaaatac
aaacggtttacggcagacggcacacacccgggaatgaaaatcgatttgtccaataatttt
cgcagccgcgcggaagttttgcacggcacgaactttatttttaagcaaattatgggggaa
acagtcggggagatcgaatatgacgaaacggcggaactaaaatatggcgccgttgactat
ccagacagtgagcatgctgcgccagagctgatcgtgattgaccggaatagcgaagaaggc
gaagaaagcggggaattggacgcaaacgatctggcggcagcccagctcgaagcgcgcatg
atggcaaaaaaaataaaggagatcgtctctgagccgctgcatgtctttgatcgcaaagca
aagcggatgcgccgcgccatgtatcgggacatcgtcattctcctccgttcgatgacggct
gctccgcaaataatggaagaatttcgcgcacaaggtattccggtgtatgcggatttgtct
tccggatattttcaggcgacagaaatagctgtcatgctgtcgttattaaaggtgatcgat
aatccatatcaagatatcccgcttgcgtcggttttgcgttctcccattgtcggcttaaac
gaaaatgagttagcgctgatccgcattcatgagaaaaaaggcacgttttatgaggcgatg
atgtcatttttacataaagcggcggataacaaggaagaggaaatgctgcagcaaaaattg
cgccttttttccgaacagctgcatcaatggcggacaatggcgcggcagcgttcattggcg
gatgtgatttggcagctctatcgggatacgcacttttatgattttgtcggcggtttgcca
ggcggaaagcagcgccaggcgaatttgcgcgcgctttatgaccgggcgcgtcaatatgaa
gcgacgtcatttcgcgggctgttccgctttttgcggtttatcgagcgcctgcaagaacgc
ggcgatgatttaggagcggcgcgtgcgcttggcgaacaagaagatgttgttcgcattatg
acgatacatagcagcaaagggcttgaatttccgatcgtctttgtcgctggtttggcgcgt
ccgtttaacacaagggatttatatggatcgtatttgcttgataaagaactcggttttgcg
gcgcgttttgttgatccgaagctgcgcatcagctatccgacattgccgcaaatcgcgatc
aggcagaaaaaacggctcgattatttggcagaagaaatgcgaattttatacgtcgcgcta
acgagggcgaaagagaagctatacttagttgcggcggtgaaagatgcgcaaaaggaaata
gacaaatggaaaagcactgcggccgaagaagagtggcttttgccggatgatgtccgcgct
gcggcgcgttgttatttagactggatcggaagggcgctcatccgccaccgcgacgggcaa
cgcttaggcgacttgtcccatgtttgccgagaagtcgcttcccatccatccgtttggcgc
ataacgatagttccggctagagaactgcatgacgccaaccaagaaacagagcggttggat
gaacaaatcgccactgctctgaagcggggagagcgtgttccaacagggggatatgcagaa
gaagtgcagcgtctcctttcatggaagtatgcatatgagaaagaaacgcttgtccgcgcg
aagcaggcggtctccgaattaaaacggcaccgtgaaattttcggggaaaacgcggatata
atgctgcttcattcattttccacgccgctgtttgaacggcctatgtttatgagagaaaaa
acattgacaccagcggaaaaaggaacagcgatgcacatcgtgatgcggcatgttgatttg
acagtgccgattacggaagaagcggttcgcgagcaaatagcgaaattagtgcaaatggag
ctgttaacgcacgagcaggcggaagcggttaacgtttcgagcattgttgcatttttcgat
acggaaatcggcaagcgcctccgcactgctagcgaagttcaccgggaaataccgtttagc
ttggcgctgccggcaaaagaagtgtacggagatggagttggcaaagaaggaaacattctc
gtccaaggtgtcattgactgtttgtttgccgacgaaaaagggcttgtattaatcgacttt
aaaaccgatgcagtaaacaggttcgcaggagggtggcgcgaagcaaaacaggtgatgctc
tcccgttatcaaacacaaatgcaattatatcgccgcgctgtggaacaaatttggaaaatg
aacgtggatgaatgttatttatatttatttgatggctctcatcttcttccgatttaa
DBGET
integrated database retrieval system
