Parageobacillus thermoglucosidasius C56-YS93: Geoth_3511
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Entry
Geoth_3511 CDS
T01531
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
gth
Parageobacillus thermoglucosidasius C56-YS93
Brite
KEGG Orthology (KO) [BR:
gth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gth03009
]
Geoth_3511
Enzymes [BR:
gth01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Geoth_3511
Ribosome biogenesis [BR:
gth03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Geoth_3511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
TRM5-TYW2_MTfase
Methyltransf_25
Methyltransf_15
MTS
Cons_hypoth95
PrmA
RrnaAD
Methyltransf_11
TRM
PCMT
Methyltransf_4
Methyltransf_12
RTBV_P46
N6_N4_Mtase
TPMT
Motif
Other DBs
NCBI-ProteinID:
AEH49359
LinkDB
All DBs
Position
complement(3430390..3431769)
Genome browser
AA seq
459 aa
AA seq
DB search
MANIEAPVAKNEYYDATFEDLTHDGLGVAKIDGFPIFVKNGLPGERAKIKVIKVKKGYGY
GRLIELYEQSPDRAEPSCPIYKQCGGCQLQHLSYDGQLRAKQKQVKEVMARIGKLENVIV
HPVIGMKNPWRYRNKAQVPVGEREGRLVVGFYQERSHEIIDMDACLIQQEMNDAVVRTVK
KICEKYRIPVYNEATHKGVLRHIMARYGAATQEVMVVLITRTAELPHKKKIVQEIIESVP
NVKSIIQNINPKKTNVIMGDETKVLWGAEYIYDYIGDIQFAISARSFYQVNPAQTKVLYE
KALEYAQLTGEETVIDAYCGIGTISLFLAKKAKKVFGVEVVPEAIEDAKRNAALNRITNV
EFAVGEAEAVIPKWYKQGIRADCIVVDPPRKGCDETLLQTIIAMKPKRVVYVSCNPATLA
RDLRILEDGGYQTLEVQPVDMFPHTAHVECCALIKRIEE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatatcgaagcaccagtagcgaaaaatgaatattatgacgcaacatttgaagat
ttgacacatgacgggttaggtgtcgcaaaaatcgatggattcccaatttttgttaaaaac
ggtttgccgggtgagagggcgaaaatcaaagtaattaaagtaaagaaaggatatggctac
ggacgcctcatcgagctgtatgagcaaagcccggaccgcgccgagccatcatgtccgatt
tacaagcaatgcggcggctgccagctgcagcacttaagctacgatgggcagcttcgcgcg
aaacaaaaacaggtgaaagaagtgatggcgcgcatcggcaaattggaaaatgtcatcgtg
catccggtcatcggcatgaaaaatccgtggcgctaccgcaacaaagcgcaagtacctgtc
ggcgagcgcgaaggcaggcttgtcgtcggcttttaccaagagcgaagccacgaaattatc
gatatggacgcatgcttgatccagcaagaaatgaatgatgccgttgtgcggacggtgaaa
aagatttgcgaaaaataccgcattcctgtttataacgaagcaacgcataaaggagtgctc
cgccatattatggcgcgttacggggcggcgacgcaggaagtgatggttgtcctcattacc
cgcacggcagagttgccgcacaaaaagaaaattgtgcaggaaatcattgaatcagtgcca
aatgtgaagtcgattattcaaaacatcaatccgaaaaagacgaacgtcattatgggtgac
gagacgaaagtgttgtggggagccgaatacatttatgattacatcggtgatattcaattc
gcgatctcggcacgttctttttatcaagtcaatcccgcgcagacgaaagtgctgtatgaa
aaagcgttggaatacgcgcaattaacgggggaagaaacggttattgacgcctactgcggc
atcggcacaatttccttgtttttagcgaaaaaagcgaaaaaagtgttcggcgttgaagtc
gtgccggaagctattgaagatgccaagcgcaatgcggcattaaatcgcatcactaacgtc
gaatttgccgtcggcgaggcggaggcggtcattccaaaatggtacaagcaaggcatccga
gctgattgtatcgtcgtcgatccgccgcgcaaaggctgtgatgaaacgcttttgcaaacg
atcatcgccatgaagccaaagcgcgtggtgtacgtttcctgcaacccggcgacattggca
agagatttgcgaatcctcgaagacggcgggtaccaaacattagaagtgcagccggtggat
atgtttccgcatactgcgcatgtggaatgctgtgcgttgataaagaggattgaagaataa
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