KEGG   Parageobacillus thermoglucosidasius C56-YS93: Geoth_3541
Entry
Geoth_3541        CDS       T01531                                 
Name
(GenBank) CRISPR-associated HD domain protein
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
gth  Parageobacillus thermoglucosidasius C56-YS93
Brite
KEGG Orthology (KO) [BR:gth00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gth02048]
    Geoth_3541
Enzymes [BR:gth01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Geoth_3541
Prokaryotic defense system [BR:gth02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    Geoth_3541
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD ResIII Helicase_C AAA_22 NPHP3_N PhoH AAA_25 AAA_19 Cas3_HD
Other DBs
NCBI-ProteinID: AEH49389
LinkDB
Position
complement(3467579..3470062)
AA seq 827 aa
MYLSHNNPDKKLTVHLKEVYEYSQDMLKHVPLSDENRDMLEYISKIVAVAHDFGKYLSYF
QDYLRTGETNGDLHHHSFISAVFAAHLLRHPANLNASWSEFAPLLGYFVVMHHHGNLRDI
SLDVTKSRHIAENTVQDSLYYRVNTLKQQIDDIKNHASAIVEDLSPLWDELSIPLSLSAE
LHSFLQNYEKAFDEVYRQYYLIDKRRKQELTRELYYYVLLLYSVLIDADKLSAANIERKP
RVHIPAHLVDQYREANFDVNVTEGTNGWRNRMYNVVMERMEKLFKTKPEQRLFTLTAPTG
AGKTLLSLSVALKWREQAERQYGYSPKIIYALPFTSVIDQNEKVIRDLLSQLADFHANEQ
RYLVKHHHLSTFQYRTENEELPLRKALLLTESWEAELIVTTFVQLFHTLIGYENRALKKF
HQIAGSIIILDEIQNVPMEYWPLLRSVLYKMAELFSCKILLLTATQPLIFPEGETVELLE
SELVKPIDFFKEMERVELHWLGGDKGAYSPAEWMELFQNRFEDGKTYLAIFNTIKTSIEI
YEGIKEWLKERGYDVIYLSTNIVPCERKRRIERIRQLLKEKKKVVVISTQVVEAGVDVDF
DVVYRDLGPIDSIVQAAGRCNRNGKLHELGKVYITPMEREGKLESQYVYKGVHTKIAKEV
LPKTPVSEHQFFDIIMQYFTEVRGKKSFDASDGIISAMEELKFDAKDKSGSKNKPKYVSE
FQLIENAHQAVDVFVEVDDQAMDIWQQYIQQVIEEKDFETRFENYLRLKKDVRQYVISAP
IKLVKNLDRDLYEKTRMIHLANDILNQYYNSEYGLIRTSEMVDAWIM
NT seq 2484 nt   +upstreamnt  +downstreamnt
atgtatttgtctcataataatccagacaagaaattgactgtacatttaaaggaagtatac
gaatactcgcaagatatgcttaagcatgtgccgctgtctgacgaaaaccgggatatgctc
gaatatataagcaaaattgttgcggtggcgcacgatttcggtaaatatttatcatacttt
caggattatttacggactggagagacaaatggcgacttgcatcatcactcttttatttcc
gccgtatttgccgcccatcttttgcgccatccggcgaatttaaatgcttcgtggtctgaa
tttgccccgttattaggctatttcgtcgttatgcatcatcatgggaatttacgcgatatt
tccttagatgtaacaaaatcgcgccatattgcggaaaataccgtacaagattcactatat
taccgagtcaatacattaaaacagcaaatcgatgatataaagaaccatgcttctgcgatt
gtggaagatttatctcctttatgggatgaactgtccattccattgtctctttcagcagaa
ctgcacagcttccttcaaaattatgaaaaagcgttcgatgaggtataccgccaatattat
ttgatcgataaacgaagaaaacaagaattgacgagggaactttattattatgtgctattg
ctatattctgtgcttattgatgccgacaaattatcggcggcaaacatcgaacgaaaaccg
cgcgttcacattccagcacatcttgtcgaccagtaccgcgaagcgaattttgatgtgaac
gtgacagaaggaacgaatggatggcgcaaccggatgtacaacgtagtgatggaacgaatg
gagaaactttttaaaacaaaaccagaacagagattgttcacattaacggcgccgactgga
gcgggaaaaacgctactgtctctttctgtggcattaaaatggcgcgaacaagcggaaagg
cagtacggctattcaccaaaaattatttacgcattgccgtttacaagcgtcatcgatcaa
aacgaaaaagtaatccgtgatttgttaagccagttggctgattttcacgcaaatgaacaa
cggtatttagtgaaacaccatcatttatctacttttcagtacaggacggaaaacgaagaa
ttgcctttgcggaaggcgttgttgctgacggaaagctgggaggccgagctgattgttacg
acatttgtgcaattgtttcatacattgattggctatgaaaaccgcgcgttaaaaaaattc
caccaaattgccggaagcattatcattctcgacgaaattcaaaacgtgccgatggaatat
tggcctttgttgcgttccgtgctgtacaaaatggcagaattgttttcctgcaaaattttg
ttgttaacggcgacgcagccgctgatttttccggaaggggaaacggtggaacttttagag
tcagaattggtgaagccaattgacttttttaaagaaatggaacgggtcgagcttcattgg
ctgggaggggataaaggcgcatacagcccagcggaatggatggaactgtttcaaaaccgt
tttgaagatggaaaaacttatttggcgatttttaacacaattaaaacatcgattgaaatt
tatgaagggataaaagaatggctaaaagaacgcggttatgatgtcatctacctttctaca
aatattgtgccttgtgagcggaaacgccgcattgaacgaatcagacagcttttaaaagag
aagaagaaagtcgttgttatttcaacgcaagttgtcgaagcaggagtcgatgttgatttt
gacgtggtgtatcgcgacttagggcctattgattccattgtccaagcggcggggcgctgc
aatcgtaacggaaagttacatgaacttggcaaggtgtatataacgccaatggagcgagag
ggaaagttagaatcacaatatgtgtataagggtgttcatacaaaaatagcgaaggaagtg
ctaccgaaaacaccggtatctgagcatcaattttttgatatcattatgcaatattttact
gaagtgcgcggcaaaaaatcgttcgatgcttccgatgggattataagtgcgatggaagaa
ctaaaatttgatgcaaaagataagtcgggaagcaaaaataagcccaaatatgtatcggaa
tttcaattgattgaaaacgcgcatcaagcagtggatgtgtttgtcgaagtcgatgatcaa
gcgatggacatttggcagcaatatattcagcaggtgattgaggagaaagatttcgaaaca
cggttcgagaactatttgcgcctgaaaaaagacgtgcgccaatatgtcatttccgccccg
attaaacttgtaaagaatctggatcgggatttatacgaaaaaacgagaatgattcattta
gccaacgatatactaaaccaatattacaacagcgaatatggacttattcgcacaagtgag
atggtggatgcatggattatgtaa

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