Parageobacillus thermoglucosidasius C56-YS93: Geoth_3634
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Entry
Geoth_3634 CDS
T01531
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gth
Parageobacillus thermoglucosidasius C56-YS93
Pathway
gth03420
Nucleotide excision repair
gth03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Geoth_3634
03430 Mismatch repair
Geoth_3634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gth03400
]
Geoth_3634
Enzymes [BR:
gth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Geoth_3634
DNA repair and recombination proteins [BR:
gth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Geoth_3634
MMR (mismatch excision repair)
Other MMR factors
Geoth_3634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_30
ResIII
Terminase_6N
DEAD
DUF3226
Motif
Other DBs
NCBI-ProteinID:
AEH49468
LinkDB
All DBs
Position
complement(3562042..3564234)
Genome browser
AA seq
730 aa
AA seq
DB search
MNFLSEKLLANLNEQQQAAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLLAEKQVAPWNIL
AITFTNKAAREMKERVQALLGGAAEEIWISTFHSMCVRILRRDIDRIGIDRNFSILDTTD
QLSVLKNILKEKNIDPKKFDPRSILGTISSAKNELLSPEKFAKKAGNYYEKIVSDVYEEY
QKRLLRNHALDFDDLIMTTIQLFERVPEVLEHYQYKFQYIHIDEYQDTNRAQYMLVKMLA
SRFQNICVVGDADQSIYRWRGADIQNILSFEKDYPNAKVILLEQNYRSTKRILQAANEVI
ENNVNRKPKKLWTENPEGQKIVYYEAMNEADEAQFVAGKIKEYVESGKRRYSDFAVLYRT
NAQSRVMEEVLLKSNIPYQIVGGLKFYDRKEIKDILAYLRVIANPNDDISLLRIINVPKR
GIGASTLDKIVNYASENELSVFEALGELEHIGLSARIAASLLEFRRMLEQWGQLQEYVSV
TELVEEVLDKSGYREMLKAENTLEAQSRLENIDEFLSVTKHFENVSEDKSLIAFLTDLAL
ISDIDQLNDADGEDGDAVVLMTLHSAKGLEFPVVFLIGMEEGIFPHSRSLEDEDEMEEER
RLAYVGITRAEEELFLTSAQMRTLFGYTNMNAVSRFIHEIPEELVERVNKRTAWAPAGKQ
TAFRKMAVASSTDGETVPWKVGDKVEHKKWGIGTVVSVRGEGEDKELDIAFPSPVGIKRL
LAKFAPITKV
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
gtgaattttttgtcggaaaaactactcgctaacttaaatgaacaacagcaagcagcggtt
aaaacgacggaaggaccgcttctcatcatggcgggggcgggaagcggaaaaacgcgcgtg
ttaacgcaccggatcgcctatttgctggcggaaaagcaggtcgcgccgtggaacatttta
gcgataacgtttaccaataaagcggcgcgcgaaatgaaggaacgcgtgcaggcgctgctt
ggcggggcggctgaggaaatttggatttccacgtttcactccatgtgtgtccgcattttg
cgccgcgatattgatcgcatcggcattgaccgcaatttttccattttagacacgaccgac
caactttcggtgttaaaaaacattttaaaagaaaaaaatatcgacccgaaaaaatttgac
ccccgctcgatactcggaacgatcagcagcgcgaaaaacgaattgctctcccctgaaaag
ttcgcgaaaaaagccggaaactactatgaaaaaatcgtcagcgacgtatatgaggaatat
caaaagcggcttttgcgcaaccatgcgctcgattttgatgacttaattatgacgacgatt
cagttgtttgagcgtgtgccggaagtgctcgagcattatcaatataaatttcaatacatt
catattgacgagtatcaagacaccaaccgggcgcaatatatgcttgtaaaaatgctggcg
tcgcgttttcaaaacatatgcgtcgtcggcgatgccgatcagtcgatttatcgctggcgc
ggcgcagacatccaaaacattttatcgtttgaaaaagattacccgaacgcgaaagtcatc
ttgcttgagcaaaattatcgttcaacgaagcggattttgcaggcggcaaacgaagtcatt
gaaaacaatgtcaaccgcaagccgaaaaagctgtggacggaaaacccggaaggacaaaaa
atcgtatattatgaagcgatgaatgaagcggatgaagcgcaatttgttgccggcaaaatt
aaagaatatgtggaaagcggaaaacgccggtattctgattttgcggttttataccgcacg
aacgcccaatcgcgggtgatggaagaagtgctgctcaagtcgaacattccttaccaaatt
gtcggcggcctgaagttctatgaccgcaaagaaattaaagatattttggcatatttgcgg
gtgattgcaaacccgaatgatgatattagtttgctgcgcatcattaatgtgccgaaacgg
ggcatcggtgcttccacgctcgataaaatcgtaaactatgcttctgaaaacgaattatcg
gtattcgaagcgctcggcgaacttgagcatattgggctctctgcgcgcatcgccgcttcc
ttgctggaatttcgccgcatgcttgaacaatgggggcagctgcaagaatacgtttctgta
acggaattagtggaagaagtgttggacaagtctggttaccgcgagatgctgaaagcggaa
aacacgctggaggcgcaaagccgtttggaaaacatcgatgagtttttgtcggtgacgaag
cattttgaaaacgtaagcgaagataagtcgttaattgcgtttttaaccgacttggcatta
atttctgatattgaccagcttaatgacgcggacggcgaagacggggacgcagtcgtgctt
atgacgctccattccgcaaaagggttggaatttccggttgtctttttaatcgggatggaa
gaaggaatttttccacatagccgctcactggaagacgaagatgagatggaagaagagcgc
cgcctcgcttatgttgggattacccgcgcggaagaagaactgtttttaacaagcgcgcaa
atgcggacattgtttggatatacaaatatgaacgcggtatcccgcttcattcacgaaatt
ccagaagagctagtcgagcgggtgaacaaacgaacagcatgggcaccggccggaaaacaa
acggctttccggaaaatggcggttgcctcttctactgacggcgaaacggtcccttggaaa
gtcggagataaagtcgaacataaaaaatggggaatcggcaccgttgtcagcgttcgcgga
gaaggagaggataaagagcttgacatcgcgttcccaagcccggttggaattaaacggttg
cttgcgaaattcgctccgattacaaaggtgtaa
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