Gluconobacter thailandicus: FXF46_00505
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Entry
FXF46_00505 CDS
T06199
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
gti
Gluconobacter thailandicus
Pathway
gti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FXF46_00505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gti03019
]
FXF46_00505
Enzymes [BR:
gti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FXF46_00505
Messenger RNA biogenesis [BR:
gti03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FXF46_00505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_22
Helicase_C_2
AAA_19
Utp25_C
DUF5645
Motif
Other DBs
NCBI-ProteinID:
QEH94911
UniProt:
A0AAP9EP39
LinkDB
All DBs
Position
complement(93534..94841)
Genome browser
AA seq
435 aa
AA seq
DB search
MTSFAELNLAEPIQKALAEEGYTTPTPIQAGAIPYLLEGRDLLGLAQTGTGKTAAFALPI
LDYLLRNRRPPAPKTVRVLVLAPTRELASQIDESFGAYARHMKLSHAVVFGGVGQGRQIE
ATRRGVDVLVAAPGRLLDLVGQGYIDLSALEVLVLDEADRMLDMGFVRDIRRIMALLPAR
RQTVLFSATMPQSISDLAHSLLSNPATVQVTPESSTVDRIRQAVMFVESEKKKDATLMLV
ESSNVVRAVVFTLMKHEANKVAEFLNKNGITAEAIHGNKSQGARERAMSGFRTGTVKVLV
ATDIAARGIDVDDVSHVFNYDLPNVPESYVHRIGRTARAGRDGWAVSLCDAEQRAWLKDI
EKKIDKAIPVVTDHPYHSDAAQNSTMRPPVLGGGRGGGGQRGGGNGGGGRRRPGPPPSAR
GSAGRRGGARSAGHR
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtttcgcagagctcaatcttgccgaaccaatccagaaggcacttgccgaagaa
ggatatacgacaccgacccccattcaggctggtgcaattccttacctgcttgaagggcgt
gatcttcttggtctggcgcagacaggtaccggaaagacagcggctttcgccctgccgatc
ctcgactatcttctgcgcaaccgtcgccctccggcaccgaagacagttcgtgtgctggtg
ctggctccgacacgtgagctcgcctcccagattgacgaaagcttcggggcttatgcccgt
cacatgaaactgtctcatgctgtcgttttcggtggcgtggggcaggggcgtcagatcgag
gcaacccgccgtggcgttgatgtgctggttgcagcgccgggccgactgctggacttggtg
gggcagggttatattgacctgtcggctctcgaagtgctggtgcttgatgaagccgaccgg
atgctggacatgggcttcgtccgtgacatccgtcgcatcatggcgcttctgccggcacgt
cgtcagacggttctgttctccgcaacgatgccgcagtccatcagtgatctggcgcattcc
ctgctgagcaatcctgcgacggttcaggttacgcctgagtccagcacggtggatcggatc
cggcaggctgtgatgttcgttgagtcggagaagaagaaagacgcaacgctgatgctcgtt
gagagctcaaatgttgtgcgcgccgtcgttttcacgctgatgaagcatgaagcgaacaag
gttgcggagttccttaacaagaacggtattaccgctgaggccattcacggtaacaagtca
cagggtgcccgtgagcgcgccatgtcgggtttccgtaccggtacggtcaaggtgcttgtt
gctacggatattgctgcacgtgggattgacgttgacgacgtatcccacgtctttaactac
gatctgccgaatgttcctgaatcctacgttcatcgtattggccgtacggctcgtgcagga
cgtgacggatgggccgtgtcgctgtgcgatgccgaacagcgtgcgtggctgaaggatatt
gaaaagaagatcgacaaggccattccggtcgtgaccgatcatccgtatcactccgatgca
gcccagaattccacaatgcggccacccgttcttggtggtggacgtggtggtggcgggcag
cgcggcggtggaaatggtggcggtggccgtcgtcgtccaggaccgcctccatcggctcgt
ggatccgctggccgtcgtggtggcgcacggtctgccgggcaccggtga
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