Gluconobacter thailandicus: FXF46_01170
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Entry
FXF46_01170 CDS
T06199
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
gti
Gluconobacter thailandicus
Pathway
gti02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gti00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FXF46_01170 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gti03021
]
FXF46_01170 (rpoD)
Transcription machinery [BR:
gti03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FXF46_01170 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Fib_alpha
IML1
Motif
Other DBs
NCBI-ProteinID:
QEH95023
UniProt:
A0AAJ0QNC2
LinkDB
All DBs
Position
complement(221818..223770)
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AA seq
650 aa
AA seq
DB search
MATKTASGTDRNAQEQEGDATLLDTQSAAVKRLIAKGRERGHITFDELNAVLPQDQMSSE
QIEDVMAALSEMGIQVLENEEQDDAEPAQEEAKEEAEESDEPQGGNIDAEAASRTDDPVR
MYLREMGSVELLSREGEIAIAKRIEAGRDEMIGGLCESPLTIRAIISWHERLKDGEMLLR
DIVDLEASQAGEPGPEGEEGEEGEESADDDASDDDTEEGDGEQQEGSGLSLSALEEKLKP
EILARFEAIEPLYHKLRQLQVKRLEALTAGEESTDKSEQVYEELRRELVSLVEQVHLHNN
RIEELVAQIKVHVQRLNQLEGRMLRLAESCKITRDDFLLKYRNREMDPTWIEFICTLPGK
GWKTLTTRHLEQLRSLRGELSALAHETGLPVGEFRRVYATISRGERDSTRAKKEMIEANL
RLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIA
DQAKTIRIPVHMIETINKLVRTSRQMLHEIGREPAPEELAEKLGMPLEKVRKVLKIAKEP
ISLETPIGDEEDSHLGDFIEDKTAVIPLDAAIQTNLREATTRVLASLTPREERVLRMRFG
IGMNTDHTLEEVGQQFNVTRERIRQIEAKALRKLKHPSRSRKLRSFLDDN
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaaaacagcctctggtacggatcggaacgcgcaggaacaggagggggatgcc
actcttcttgatacgcagtccgctgccgtaaagcggctgatcgccaaggggcgtgaacgt
ggccacatcacgtttgacgagctgaacgccgttctgccgcaggatcagatgtcctccgag
cagatcgaagacgtgatggcagctctgtcagaaatgggcattcaggttctggagaacgaa
gagcaggacgacgctgagcctgctcaggaagaagccaaggaagaggccgaggagtccgac
gagccgcagggcggcaatatcgacgccgaggctgccagccggacggatgacccggttcgt
atgtacctccgcgagatgggctcggtcgagcttctgtcccgtgaaggcgaaattgccatc
gccaagcgtatcgaggccggtcgggacgagatgatcggtgggctttgcgaaagtccgctg
acgatccgtgccatcatttcctggcatgagcgtctcaaggatggcgagatgctgcttcgt
gacatcgtggatctggaagccagccaggctggtgagccagggcccgagggcgaggaaggt
gaagaaggcgaagagtcggctgacgacgatgcgagcgatgacgacaccgaggaaggtgac
ggcgagcagcaggaaggcagtggcctctccctgtccgctctggaagaaaagctgaagccg
gaaatcctggcgcgctttgaagccattgagccgctgtatcacaagcttcgtcagttgcag
gtcaagcgtcttgaggccctgacggccggtgaagaatcaacggacaagtccgagcaggtt
tacgaagagctgcgtcgtgaactggtcagtctggttgagcaggttcatctgcataacaac
cggattgaggaactggtcgctcagatcaaggtccatgttcagcgtttgaaccagcttgaa
ggccggatgctgcggcttgcggaaagctgcaagatcacgcgtgatgacttcctgctgaag
tatcgtaaccgcgagatggacccgacctggatcgagttcatctgcacccttccgggcaag
ggctggaagacactgacaacccgccacctggagcagcttcgtagcctgcgtggagaactg
tctgcgctggcgcatgagacgggtctgccggttggtgaattccgtcgcgtatatgcgacc
atttcccgtggtgagcgtgattccacgcgtgccaagaaggaaatgatcgaggcgaacctg
cgtctcgtgatctcgattgccaagaagtacacgaaccgtggtctgcagttcctggatctg
attcaggaaggcaacatcggtctgatgaaggccgtggacaagttcgagtaccgccgtggt
tacaagttctcgacctatgccacctggtggatccgtcaggccatcacgcgttccatcgcg
gatcaggccaagacgatccgtattccggtgcacatgatcgagacgatcaacaagctggtg
cgcacgtcccgtcagatgctgcatgagatcgggcgtgagccggctccggaagagcttgct
gagaagcttggcatgccgctggaaaaggttcggaaggtcctgaagatcgccaaggaaccg
atctcccttgaaacgccgattggcgacgaggaagatagccatcttggtgacttcatcgag
gataagacggccgtcattccgttggatgctgcgatccagacgaacctgcgtgaagcgacg
acccgtgtgctggcgtccctgacgccgcgtgaagagcgcgtgcttcggatgcgtttcggc
atcggcatgaacacggatcacacgcttgaggaagtcgggcagcagttcaacgtgacccgc
gagcgtatccgtcagatcgaggcgaaggcgcttcgtaagctcaagcacccgagccgtagc
cgcaagctgcggtccttcctcgacgataactga
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