Gluconobacter thailandicus: FXF46_09555
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Entry
FXF46_09555 CDS
T06199
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
gti
Gluconobacter thailandicus
Pathway
gti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FXF46_09555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gti03019
]
FXF46_09555
03009 Ribosome biogenesis [BR:
gti03009
]
FXF46_09555
Enzymes [BR:
gti01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
FXF46_09555
Messenger RNA biogenesis [BR:
gti03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FXF46_09555
Ribosome biogenesis [BR:
gti03009
]
Prokaryotic type
rRNA processing factors
FXF46_09555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
QEH96507
UniProt:
A0AAP9EU04
LinkDB
All DBs
Position
complement(2040490..2043276)
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AA seq
928 aa
AA seq
DB search
MFPLAQSATLEHRGVQFSMTKRMLIDTTHAEETRVVVMDGDRVEDYDVETSSRKQLKGNI
YLAKVIRVEPSLQAAFVEYGGNRHGFLAFSEIHPDYFQIPVADREKLLAIQEEDVASEQR
TDLPESEEETVSDETDETENQDRRTPETVGGEHDTGEESAASRRTARFLRNYKIQEVIRR
RQVLLVQVVKEERGNKGAALTTYVSLAGRYCVLMPNALRGGGVSRKITSDTDRRRLRDII
AELNLPKSMAMIVRTAGAGRPGPEIIRDCEYLLQLWDDIRSHALSSVAPTLVYEEASLIK
RAIRDLFSKDIEDIMVDGETAWKSAREFMRLLMPHNAGKVKLWQNRGQSLFARYNVEGHL
DAMFSPTARLKSGGYLVINQTEALVAIDVNSGKSTSQRNIEETALRTNLEAAEEVARQLR
LRDLAGLVVIDFIDMESRRHNAQVEKRLKESLRTDRARIQVGHISHFGLLEMSRQRLRPS
IAESLLTVCPHCQGTGFIRGTESSALHVLRAIDEEGTRQRAAAIEVYIGPSIALYILNHK
RDWLSDIEQRHRMRVIFRTEEELPASEMRIERLSPQTAAPAYVPAQAAAPQTVRTIEIIE
DEAPALPQAIAAEAAPAPARAEEAEVETSDEEEGNNGNRRRRRRRRRGRRDQSSENETTQ
GNASETQAEQPFYPQEQENGEVGLIPGRRRTRFKRVQKDDEAEAEAPASAPAREETPAPQ
QSRQAPAQNQRRREERPASQQRNYVGPTPADPFGGSFDIFDVIEQAEMEQAARPVRTSAA
MPAPITIDDAPVSALTEAVASPAAEPKETPKRGRGRRSTKVEVAAPVVVEEAEVEAPVPT
VAEDATVQPKRTRARRTTKASAAKVEDVAVETAAPSEEDAPAKPKRTRRTTKATKAKAEE
TAGEDSTLQPINIDELPPATRRVGWWKR
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
gtgttccctctggcccaaagcgccacactggaacatcgtggagttcagttttccatgacc
aagcgtatgcttatcgacaccacgcacgcggaagaaacgcgtgtcgtggtcatggacggt
gaccgcgttgaagattacgacgtcgagacatcgtccagaaaacagctcaagggcaatatc
taccttgccaaagtcattcgcgttgagccgagccttcaggccgctttcgtagaatacggc
ggaaaccgtcacggttttctcgccttcagcgaaattcacccggattacttccagatcccg
gttgcagaccgtgagaaacttctggccatccaggaagaagatgttgcgtccgaacagcgc
accgaccttccggaaagcgaagaagaaacagtttctgacgaaaccgacgagaccgaaaac
caggatcgtcgcaccccggaaaccgtaggcggcgaacacgacaccggggaagagagcgca
gcttcacgtcgcacggcccgcttcctgcgcaactacaagatccaggaagttatccggcgc
cgacaggtcctactcgtgcaggttgtgaaggaagaacgtggcaacaagggtgcagccctg
accacttatgtctccctcgccggccgttactgcgtcctgatgccgaacgccctgcgcggc
ggcggtgtttcccgcaagatcacgtccgacaccgatcgtcgccgtctgcgtgacatcatt
gcggagctgaacctgcccaagtcgatggccatgattgtccgcacagccggcgcaggccgc
cctggaccggaaatcatccgcgactgcgaatacctgcttcagctctgggatgacattcgc
tcacatgcgctgtcttccgttgctccgacgctggtttatgaggaagcaagcctcatcaag
cgcgccatccgcgatctgttctccaaagacatcgaagacatcatggtcgacggtgaaact
gcatggaagagcgcccgcgagttcatgcgcctgctgatgccgcacaacgctggcaaggtg
aagctgtggcaaaaccgcggtcagagcctcttcgcgcgctacaacgtcgaaggccatctg
gatgcgatgttctctccgacagcgcgcctgaagtctggtggctaccttgtcatcaaccag
acggaagcgttggtcgccattgacgtgaactccggcaagtccacttcccagcgcaacatc
gaggaaacggctctccggaccaaccttgaagcggctgaagaagtggctcgccagttgcgt
ctgcgtgacctggccggcctcgtcgtgatcgatttcatcgacatggagagccgtcgtcac
aacgcgcaggtcgagaagcgcctcaaggaatccctgcgcacggatcgcgcacgcattcag
gtcgggcatatctctcatttcggtctgctcgaaatgtcccgccagcgtctgcggccgtcc
attgcagagtccctgctgacggtctgcccgcactgccagggaaccggattcattcgtgga
acggaaagctctgccctgcatgtgcttcgtgccattgacgaagaaggcacccgtcagcgc
gctgcagcaatcgaagtctatattggcccgagcatcgcgctctacattctgaaccacaag
cgcgactggctgtcggacatcgagcagcgtcaccgcatgcgcgtgatcttccggacggaa
gaagaactgcctgcttccgagatgcgcatcgaacgcctcagtccgcagacggcggctccc
gcctatgtccctgctcaggctgcagcacctcagacggtccggacgatcgagatcattgaa
gacgaagctccggctcttccgcaggctatcgctgcagaagcggctccggcacctgcccgt
gcagaagaagccgaagtggaaaccagtgacgaggaagagggcaacaacggcaatcgtcgc
cgtcgccgtcgtcgtcgtcgtggtcgccgggatcagtcttccgagaacgagacgacgcag
ggcaatgcttccgagacgcaggccgagcagcctttctatccgcaggaacaggaaaatggc
gaggtcggcctcattccaggacgccgtcggacccgcttcaagcgcgttcagaaggacgat
gaggctgaagctgaagctccggcatctgctcctgcgcgggaagaaacgcctgctccacag
cagtcccgtcaggctcccgctcagaaccagcgccgccgtgaagagcgtccagcctctcag
cagcgcaactatgttggaccgacaccggctgacccgttcggtggcagtttcgacatcttc
gatgtgatcgaacaggcagagatggaacaggcagcacgtccggttcgcacctctgcggca
atgcctgccccgattactattgatgacgcacctgtttcagctctcacggaagccgtggct
tctcctgctgctgagccaaaggaaacgccgaagcgtggccgtggtcgtcgcagcacgaag
gtagaagtggcagcgcctgttgtggtggaagaagccgaggtcgaagctcctgtccctacc
gtcgcagaagacgccacggtccagccaaaacgcacgcgcgcccgtcgtacaaccaaggcc
tccgcagccaaagttgaggatgtggctgttgaaacggcagccccttccgaagaagatgct
ccggccaagccgaagcgcacgcgtcgtacgaccaaggccacaaaagccaaggctgaggaa
acggctggtgaagacagtactcttcagccgatcaacattgacgaacttcccccggcaaca
cgccgcgttgggtggtggaagcgctga
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