Geobacillus thermoleovorans KCTC 3570: GT3570_01495
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Entry
GT3570_01495 CDS
T04710
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gtk
Geobacillus thermoleovorans KCTC 3570
Pathway
gtk03420
Nucleotide excision repair
gtk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gtk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GT3570_01495
03430 Mismatch repair
GT3570_01495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gtk03400
]
GT3570_01495
Enzymes [BR:
gtk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GT3570_01495
DNA repair and recombination proteins [BR:
gtk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GT3570_01495
MMR (mismatch excision repair)
Other MMR factors
GT3570_01495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
DEAD
Terminase_6N
SUIM_assoc
Motif
Other DBs
NCBI-ProteinID:
AMV09649
LinkDB
All DBs
Position
271822..273996
Genome browser
AA seq
724 aa
AA seq
DB search
MNFLSEKLLAHLNKEQQEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLMAEKQVAPWNIL
AITFTNKAAREMKERVQALLGGAAEDVWISTFHSMCVRMLRRDIDRIGINRNFSILDPTD
QLSVIKAILKDKNIDPKKFEPRTILATISGAKNDLLTPEQFAKRASTYYEKIVGDVYQEY
QQRLLRNHSLDFDDLIMTTIHLFDRVPDVLQYYQYKFQYIHIDEYQDTNRAQYTLVKKLA
DRFQNICAVGDADQSIYRWRGADIRNILSFERDYPNAKVILLEQNYRSTKRILQAANEVI
AHNVNRKPKRLWTENPEGKPIVYYEAMNEVDEAQFVARRIQEAVESGERRYRDFAVLYRT
NAQSRVIEEMFLKANIPYQIVGGLKFYDRKEIKDILAYLRVIANPDDDLSLLRIINVPKR
GIGASTIDKLVRYAAEHELSLFEALGELEMIGFSAKTAGALAAFRGQLEQWTQLQEYVPV
TELVEEVLDQSGYREMLKAERTIEAQSRLENLDEFLSVTKHFENVSDDKSLVAFLTDLAL
ISDLDELNGTDQAAEGDAVVFMTLHAAKGLEFPVVFLIGMEEGIFPHLRSLENEDEMEEE
RRLAYVGITRAEEELVLTNAQMRTLFGNIQMNRPSRFLDEIPAHLLETVSRGKPSVSRSA
SARLQAGGAIRVWKVGDRANHRKWGIGTVVSVRGEGDDQELDIAFPSPIGIKRLLAKFAP
IEKV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaattttttatcggaaaagctgcttgcgcatttaaacaaagagcagcaagaagccgtt
aaaacgacagaaggcccattgctcatcatggcgggagcgggcagcggaaaaacgcgcgtg
ctgacgcaccggatcgcctatttgatggcggaaaaacaggtggcgccgtggaatatttta
gccattacgtttacgaacaaagcggcgcgtgaaatgaaggagcgggtgcaggcgctctta
ggcggggcggcggaagacgtgtggatttcgacgttccattcgatgtgcgtccgcatgttg
cgccgcgacattgaccgcatcggcatcaatcgcaatttttccatccttgacccgacggat
cagctttcggtcatcaaagcgattttgaaagacaaaaatatcgatccgaaaaaatttgag
ccgcggacgattttagcgacgatcagcggggcgaaaaacgatttgctcacgcccgagcaa
ttcgcaaagcgggcatcgacgtactacgaaaagatcgtcggcgacgtgtatcaagagtat
caacagcgccttctccgcaatcattcactcgatttcgacgatttgatcatgacgacgatc
cacttgtttgaccgcgtgccggatgtgcttcaatattaccagtataagttccagtacatc
catatcgatgagtaccaggatacgaaccgcgctcaatatacgctggtgaaaaagctcgca
gaccggtttcaaaatatttgcgccgtcggcgatgccgaccagtcgatttaccggtggcgc
ggggcggacattcgcaatattttatcgtttgagcgcgactacccgaacgcgaaagtcatt
ttgcttgaacaaaactaccgctcgacgaaacgcattttgcaggcggcaaatgaagtcatt
gcgcataacgtcaatcgaaaaccaaagcggttgtggacggaaaacccggaagggaagcca
atcgtctattatgaagcgatgaacgaagtggacgaagcgcaatttgtcgcccgccgcatt
caagaggcggttgagagcggggagcgccgctaccgcgattttgccgtgctttatcggacg
aacgcccagtcgcgcgtcatcgaggaaatgtttttaaaagcgaacattccgtaccaaatc
gtcggcggcttaaagttctatgaccggaaagaaattaaagacattctcgcttacttgcgc
gtcatcgccaaccccgatgacgatttgagcttgcttcgcatcatcaacgtgccaaagcgt
ggcatcggcgcctctacgatcgacaaacttgtccgctatgcggccgagcatgagctgtcc
ttgtttgaagcgctcggcgagctggagatgatcggcttcagcgcgaagacggccggggcg
ctcgccgcgtttcgcggacagcttgagcaatggacgcagctgcaagaatacgttccggtg
acggaacttgtggaggaagtgctcgaccaatcgggctaccgcgagatgctcaaggcggaa
cggacgattgaagcgcaaagccggcttgagaacttggacgagtttttgtcggtgacgaag
catttcgaaaatgtaagcgacgataaatcgctcgtcgcctttttaaccgacttggcgctc
atttctgatttggacgagctgaatgggacagatcaggcggccgagggcgatgccgtcgtc
ttcatgacgctgcacgccgccaaagggcttgagtttccggtcgtgtttttgattggcatg
gaagaaggcatttttccgcatcttcgttcactggagaatgaggatgaaatggaagaagag
cggcggctggcgtatgtcggcatcactcgggccgaggaagagctcgtattgacgaacgcg
caaatgcggacgctgtttggcaacatccaaatgaaccggccgtcgcgctttttagatgag
attcccgcgcatttgctggagacggtctcgcgtgggaaaccgtctgtttcccgttcagcg
tccgctcgcttgcaggcaggcggcgccatcagggtgtggaaagtcggagaccgggcgaac
catcggaaatggggaatcggtacggttgtcagtgtccgtggcgaaggtgacgaccaagaa
ctcgatatcgccttcccgagcccgatcggcattaaacgtctgctcgctaaatttgcgccg
attgagaaagtatag
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integrated database retrieval system
