Geobacillus thermoleovorans KCTC 3570: GT3570_10695
Help
Entry
GT3570_10695 CDS
T04710
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gtk
Geobacillus thermoleovorans KCTC 3570
Pathway
gtk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gtk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GT3570_10695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtk03019
]
GT3570_10695
03400 DNA repair and recombination proteins [BR:
gtk03400
]
GT3570_10695
Enzymes [BR:
gtk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GT3570_10695
Messenger RNA biogenesis [BR:
gtk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GT3570_10695
DNA repair and recombination proteins [BR:
gtk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GT3570_10695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
AMV11387
LinkDB
All DBs
Position
complement(2140711..2142222)
Genome browser
AA seq
503 aa
AA seq
DB search
MDELTKTLRMKFGHASFRPGQREVAEDVLAGRDVLAMLPTGSGKSLCYQLPAYLLQGSVL
IVSPLVSLMEDQVEQLRRRGEKRVIAFHSLLDAEEKWQALASLAEFRFIYASPEMLQSAK
FLTALRRVCISLFVVDEAHCISQWGYDFRPDFLKLGEIRRALGAPPCLALTATAPPEVQE
DIIRTLGMDGARRHIHSVDRPNIALCVEHCSSTEDKAARLADYAKRLEGPGIIYFSSRQW
AEEMARRLEQCGAGRVAYYHAGMDGEQRLLVQQQFVYGQLDIVCCTSAFGMGVNKENVRF
VLHFHMPAQLEAYVQEIGRAGRDGAPSLAVLFYADGDRAMAQAVAEAELLSPRELREWCW
RLPEGAGWEAAMATLEAAGFTDVQKRLLAYFLEREQRAMPGWLTAEAKERLYGRMAAAIE
ARRRWKRKKLQEMDEWVHLSSCRRQALVRAFGEELTDQQNVCCDRCGLSLDGYERAVRRP
EEAPVRHWREELWDMLFGGGADE
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
ttggacgagttgacgaaaacgctgcgcatgaagttcggacatgcttcattccgcccgggt
cagcgggaagtggcggaagatgtgcttgctgggcgcgacgtgctggcgatgctgccgacc
ggaagcggcaagtcgctttgctatcagctgccagcgtatttgcttcaaggcagtgtgctg
atcgtttcgccgcttgtgtcgctcatggaggaccaagtcgagcagttgcgccggcgcggg
gaaaagcgagtgattgcttttcacagcctgcttgatgccgaagaaaaatggcaggcgctc
gcttcgcttgcggagtttcgctttatttacgcgtcgccggagatgctgcagtcggcaaaa
tttttaacggcgcttcggcgcgtatgcatttcgctttttgtcgtcgatgaagcgcactgc
atttctcaatggggatatgactttcgcccggactttttaaagcttggggagatccggcgc
gcgctcggggccccgccgtgtttggcgttgacggcgacggcgccgcccgaggtgcaggag
gatattattcgcacgctcgggatggatggcgcccgccgccatattcattccgtcgatcgc
ccgaacatcgccttgtgcgtggagcattgttcatcaacggaggacaaagcggcgcgcttg
gccgattatgccaagcgtctcgaaggcccgggaatcatttatttttcgagccgtcaatgg
gcggaagagatggcgcgccggctcgaacagtgcggcgcggggcgggtcgcctattaccat
gccggcatggacggggagcaacggctgctcgtgcagcagcaatttgtctacggtcagctt
gacatcgtatgttgtacaagcgcattcggcatgggcgtgaacaaagaaaacgtccgattt
gtgcttcattttcatatgccggcccagctcgaggcgtacgtgcaggaaatcgggcgcgcg
gggcgcgacggagcgccaagccttgctgtgttattttatgcggacggcgaccgggccatg
gcccaggcggtggcggaggccgagctgttaagtccgcgcgagctgcgtgagtggtgttgg
cggctgccggaaggagccggatgggaagcggcgatggcgacgctcgaggctgccggattc
accgacgtacaaaagcggctgttggcgtattttttagaacgggaacaacgggcgatgcct
ggttggctgacagcggaggcgaaagagcggctgtacggcaggatggcagccgccatcgag
gcgcggcggcgctggaagcggaaaaaactgcaggaaatggatgaatgggtgcacttgtct
tcgtgccggcgtcaagcgcttgtccgcgcgtttggcgaggagctgacggatcagcagaat
gtctgctgcgatcgctgcgggctttcgcttgacggctatgaacgagccgtccgccgtccg
gaggaggcgccggttcgccattggcgcgaggagttgtgggacatgctttttggcgggggg
gcggacgaatga
DBGET
integrated database retrieval system
