Geobacillus thermoleovorans KCTC 3570: GT3570_12640
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Entry
GT3570_12640 CDS
T04710
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
gtk
Geobacillus thermoleovorans KCTC 3570
Pathway
gtk03410
Base excision repair
gtk03430
Mismatch repair
gtk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gtk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GT3570_12640
03430 Mismatch repair
GT3570_12640
03440 Homologous recombination
GT3570_12640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gtk03400
]
GT3570_12640
DNA repair and recombination proteins [BR:
gtk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GT3570_12640
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GT3570_12640
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GT3570_12640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ssDNA-exonuc_C
DHH
RecJ_OB
DHHA1
YjeF_N
ThiG
DUF913
Motif
Other DBs
NCBI-ProteinID:
AMV11770
LinkDB
All DBs
Position
complement(2492059..2494425)
Genome browser
AA seq
788 aa
AA seq
DB search
MLKAKTRWEVERLDEQAVRRLAEEAGVTPLLARLLVRRGVRTASEAAAFLNPLEQPFHDP
FLLDGMERAIQRLKRAIDAGERVLVYGDYDADGVCSTSVMVSALKEAGASVEFYIPNRFT
EGYGPNMAAFRSAKERGVSVIVTVDNGIAAVKEIAAANEWGMDVIVTDHHEPGPVLPEAH
AIIHPKQPGSTYPFRDLAGVGVAFKVAHALLGRVPRHLLDLVAIGTIADLVPLVGENRLF
VAHGLEALRATERIGLRALFRQCRIDAAAINEQTVGFVIAPRLNAAGRLGGADPAVALLM
TDDENEAVQLAAEMDELNRERQQLVAQIAEEAADMVRRQFPPEEHRVLVVAGEGWNAGVV
GIVASKLVEQFYRPAVVLSIDREKGIAKGSARSIHGFDLFASLSQCRDLLPHFGGHPMAA
GMTLSLDDVEELRQRLNDIAAETLSEDDFTPPTFIDASCSIAELTLSAARSLERFAPFGV
GNPRPLVLIEGASVETMRRVGANGAHMKAVFSQDGAAIDAIGFGLGPLCEEIAPDARISA
VGELSVNEWNGFAKPQLSLCDLAVSDCQLFDVRGCRDVRPLLERLPKEKRLVVSFRCETG
QRPDVAPFRGELHCVPTEEEAGALSIDDRYVVLLDVPPRLALLSALLGSGRPARIYAVFA
QPEAQFFRTFPTREHFKWFYAFLHQHRSFPLAKRGGELARARGWTEETVHFMAKVFLELD
FISEQNGVISLVHQPAKRDLHESPTYRRRRDELEAEHQLVYSTYEQLKRCLAEMTRSQTH
EEANVSWT
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaagcgaaaacgcgttgggaggtggagcgcctcgatgagcaggcggtgaggcgg
ctggctgaggaagccggcgtcacgcccttattggcgaggcttctcgtccgccgcggggtg
cggacggcctcggaggcggcggcgtttctcaatccgcttgagcaaccgtttcatgatccg
tttttgcttgatgggatggagcgagcgattcagcgtctaaagcgggcgatcgacgcgggt
gaacgcgtgttggtatacggcgattacgatgccgatggcgtttgcagcacgtcggtgatg
gtgagtgctctcaaggaggcgggggcgtcggtcgagttctacattccgaaccgatttacg
gaaggatacgggccgaacatggcggcgtttcgctccgcaaaagagcgcggcgtttccgtc
attgtgaccgtcgacaatgggattgcggcggtcaaggaaattgcggccgccaacgagtgg
gggatggatgtcatcgtaacggatcaccacgagccaggtccggtgttgccggaggcgcat
gcgatcattcatccgaagcagccgggaagtacatatccgtttcgcgatttagccggcgtc
ggcgttgcgtttaaggtagcccatgccttgcttgggcgggtgccgcgccatttgcttgat
ttggtcgcgatcggcacgatcgctgatttggttccgcttgttggggaaaaccgcctcttt
gttgcacacgggcttgaagcgttgcgagcgacggagcgcatcgggctgcgcgctcttttt
cggcaatgccgcattgatgcggcggccatcaacgaacagacggtcggatttgtcatcgct
ccgcgcttgaacgcggcggggcgcctcggcggcgccgatccggcagtggcgctcttaatg
acggacgatgagaacgaagcggtgcagctggcggcggagatggacgagttaaaccgcgaa
cgtcagcagcttgtggcacaaatcgctgaagaagcggcggacatggtgcgccgccaattt
cctcctgaggaacatcgcgtcttggttgtggcaggcgaaggatggaatgccggagtggtg
ggcattgtcgcttctaagcttgtcgagcagttttaccgcccggcggtcgtgctttcaatc
gaccgggaaaaagggatcgccaaagggtcagcccgcagcattcatgggtttgacttattc
gccagcctgtcgcaatgccgcgacctgttgccgcactttggcggccacccgatggcggcg
gggatgacattgtcgcttgatgatgtcgaagaattacggcaacggctgaacgacatcgcc
gccgaaacgttgtctgaggacgattttacgccgccgacgttcattgatgcttcctgttcg
attgctgagttgacgctgtcggccgcccgcagccttgagcggttcgctccgtttggcgtc
ggcaatccgcggccgcttgttctcattgaaggggcgtccgttgaaaccatgcggcgcgtc
ggggcgaacggagcccatatgaaagccgtcttttcccaagacggggccgcgatcgatgcc
atcggcttcggccttgggccgttatgcgaagaaatcgctccggatgcgcgcatttcggcg
gtcggggagctgtcggtgaacgaatggaacgggttcgccaagccgcagctgtcgttgtgt
gatctggcggtcagcgactgccagctgtttgacgtccgcggctgccgcgacgtccgtcca
cttcttgagcggctgccaaaagagaagcggctagtcgtctcctttcgctgtgaaactggg
cagcgcccggacgtggcgccatttcgcggggagcttcattgcgtgccgaccgaagaagag
gcgggcgccttatcgattgacgaccgctatgtcgtgctgcttgacgtgccgccgcggctg
gccttgctgtcggcgcttcttggcagcgggcggccggcgcgcatttacgcggtgtttgcc
cagcccgaggcgcaatttttccgcacgtttccgacgcgcgaacattttaaatggttttac
gcctttttgcatcaacaccgttcgtttccgctcgccaagcgcggtggtgagctggcccgc
gcccgcggttggacggaagagacggttcattttatggcgaaagtatttttagagcttgac
tttatcagcgaacaaaacggcgtcatttcgctcgttcatcagccggcgaagcgcgatttg
cacgaatcgccgacgtaccgccggcggcgggacgagctcgaggcggagcatcagttagtc
tattccacttacgagcaattgaaacgctgtttggcggaaatgacacgttcgcaaacgcac
gaggaggcaaacgtatcatggacttaa
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