Geobacillus thermoleovorans KCTC 3570: GT3570_13455
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Entry
GT3570_13455 CDS
T04710
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
gtk
Geobacillus thermoleovorans KCTC 3570
Pathway
gtk03030
DNA replication
gtk03430
Mismatch repair
gtk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gtk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GT3570_13455 (dnaE)
03430 Mismatch repair
GT3570_13455 (dnaE)
03440 Homologous recombination
GT3570_13455 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gtk03032
]
GT3570_13455 (dnaE)
03400 DNA repair and recombination proteins [BR:
gtk03400
]
GT3570_13455 (dnaE)
Enzymes [BR:
gtk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GT3570_13455 (dnaE)
DNA replication proteins [BR:
gtk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GT3570_13455 (dnaE)
DNA repair and recombination proteins [BR:
gtk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GT3570_13455 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
AMV11933
LinkDB
All DBs
Position
complement(2661128..2664403)
Genome browser
AA seq
1091 aa
AA seq
DB search
MMFVHLHVLSGYSLFQSAAAVEALAARAKQLGYQALALTDRNVLYGAIPFYRECKQNGIR
PIIGVTADVALSGEEAFPLVLLAANEEGYRHLLEISTMMQMGETKHMEEVALVRLSGGII
AITPGSEGRVESLVAAGEWERAKEALGRYHQLFPGRLYVAVQRGEQTRAPYEAGLLQLVE
ETGVPIVATNDVRYVERSDAVAWRCLQAIGRGALLADIEDDNGRYLAGPEEMARRFADLP
EALENSLAIADQCELQIEFGGWRLPAYPVPDGETADSYLRRLSEQGLARRVPSADERYWR
RLSHELDVIQSLHFSDYFLIVADVLAYARRRGILTGPGRGSAAGSLVAYALSITDVDPIK
YGLLFERFLNPERASVPDIDLDFPDDRREEVIRYVADKYGRDRVAQIITFGTFGAKAALR
ETAKALGVPGREAEQVAALLPSKQSVTLRQWHAESAAFRRAVAAVPQGREWLAVAQKLEG
LPRHTSIHAAGVIISPEPLVRFVPLQPSHGEWPLTQYAMGALEALGLLKIDFLGLRTLTL
IEQIVRLIERQTGKPFDIRTLPLNDEKTYALLGAGDTNGIFQLESSGMKRVLAELRPSQL
EDVVAVNALYRPGPMQMIPVYIRRKRGEEPVSYAHPDLETILAPTYGVLIYQEQIMQIAA
RLAGFSLGQADVLRRAVAKKEKALLAEQRQAFVAGCVANGYPKAVAEELYRHIVRFADYG
FNRSHAVSYAMLSYAMAYMKAHYPLCFYAVMLTNASGDREKAAVYYWEAARKGINVLLPS
VNKSGFRSSVEGSAIRLGLAMVKQVGSAAKLIVEERKANGPFADFFDFAARLLPKGLGRP
ALEALISVGAFDEFGADRASLLASIDIAIEHAQWVQALQAGGLSLKPKYAAAHSWPLSER
RRREAEFLGFAVTPHPAAVCRPLLQAAGAVCVADVQGPSTVVGGAVVRIRKTRTKQGEEM
AFFTVGDESGELEAVAFPNVYRRAADILKEGQFVLLAGTIEVRGGRRQLIIRRAERLTAS
ALYIDASRQDKARLAALKPLLERHQGRTPVYLYDEAKRKLLRLPERYAADLTAPLVDELL
SLFSFGRVVVK
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcgtccacttgcatgtgttgagcggatacagtttgtttcaaagtgcagcggcg
gtggaggcgcttgcagcgagggcgaaacagctcggctatcaagcgctcgcgctcacggac
cggaatgtgttgtatggcgctattccgttttaccgggaatgcaagcagaacggcattcgc
ccgattatcggcgtgacggctgatgtcgctctttctggggaggaagcgttcccgctcgtg
ctgttggccgccaatgaagaggggtatcgccatttgcttgaaatcagcaccatgatgcaa
atgggggaaacaaagcatatggaggaagtcgctcttgtacgcttaagcggcggcatcatc
gccatcactcccggaagcgagggacgcgtcgagtcgcttgtggccgccggcgaatgggag
cgggcgaaagaggcgcttggccgctatcatcagctgtttccaggacggctgtatgtcgcc
gttcagcgcggcgagcaaacgcgagccccatatgaagccgggttgttgcagctggtggag
gaaaccggcgtcccgatcgtggcgacgaacgacgtccgttacgtggagcgcagcgatgcc
gtggcgtggcgttgcttgcaggccatcggccgcggcgcgctgctcgctgacattgaggac
gataacggccgctatttggcggggccagaggagatggcgcgccggtttgcggacttgccg
gaggcgctcgagaacagcctggcgatcgccgatcaatgcgagctgcagatcgagtttggc
ggctggcggctgccggcgtatcccgttccggacggagagacggccgacagttatttgcgc
cgcttatcggaacaagggctcgcccgacgcgtgccgtcggccgatgagcgctactggcgt
cggctttcgcatgagctggatgtgattcagtcgcttcatttcagcgactattttttgatc
gtcgccgatgtgctcgcctacgcccgccggcgcggcatcttaaccggcccgggccgcggt
tcggcggccgggtcgcttgtcgcctacgcattgtcgatcaccgatgtcgatccgatcaag
tatgggcttttgtttgaacggtttttaaatccggagcgggcgtcggtgccggatattgac
ttggattttcctgatgaccggcgcgaagaagtgattcgctatgtggcggataaatacggg
cgcgaccgcgttgcgcaaatcattacgttcggtacgttcggcgccaaagcggcgctgcgc
gagacggccaaagcgcttggcgtccctgggcgggaggcggaacaggtcgcggcgctgctg
ccgagcaaacaaagtgtgacgctccgccaatggcatgccgagtccgccgcttttcggcgc
gcggtggcagcggttccgcaagggagagagtggctggctgttgcgcaaaaactggaaggg
ctgccgcgccatacgtcgatccacgctgctggtgtcatcatcagcccggagccgctcgtt
cgcttcgtgccgctgcagccaagccatggcgaatggccgctgacgcaatacgcgatgggg
gcgcttgaagcgcttggattgctgaaaattgattttctcggtttgcgcacgctcacgttg
atcgagcagatcgtgcgtttgatcgagcggcagacaggaaagccgtttgacatccgcacg
ttgccgctcaatgatgaaaaaacgtacgcgctgcttggcgctggagatacaaacggcatt
tttcagctggaatcaagcgggatgaagcgcgtgctcgccgagctgcggccgtcgcaattg
gaagatgtcgtcgccgtcaatgccttgtatcggccagggccgatgcaaatgatccccgtt
tacatccggcgcaagcgcggggaagagccggtgtcctatgcccatcctgatcttgagacg
attttggcgcccacatacggggtgttgatctaccaggagcaaattatgcaaatcgccgcc
cggcttgccggattttcgctcggacaagcggacgtgcttcgccgggcggtggcgaaaaaa
gagaaagcgctgcttgctgagcagcgtcaggcgtttgtcgccggctgcgtggcgaacggc
tatccgaaagcagtcgccgaggaactgtaccgacacatcgtccgctttgccgattacggc
ttcaaccgaagccacgcggtcagctatgcgatgttgtcgtatgcgatggcgtatatgaaa
gctcattacccgctttgtttttatgcggtcatgctcaccaatgcttccggcgaccgagaa
aaagcggcggtatactattgggaggcggcgcgaaaagggatcaacgtccttttgccgtcg
gtcaacaaaagcggttttcgctcttccgtggaggggagcgccattcgccttgggctcgcg
atggtgaagcaagtcggctcggcggcgaagctgattgtcgaggagcggaaagcgaacgga
ccgtttgccgacttctttgatttcgctgctcgcctgctgccaaaagggctcgggcgcccg
gcgctcgaggcgctcatttccgttggggcgtttgacgagttcggtgcagatcgggcttcg
cttcttgccagcattgacattgcgatcgaacatgcgcaatgggttcaggcgctgcaagcc
ggagggctgtcgttaaaaccgaaatatgctgccgcacattcgtggcctttgtccgaacgg
cggcggcgggaagcggagtttcttggcttcgccgtcaccccgcatccggcggcggtgtgc
cgcccgttgctgcaagcggcgggggcggtgtgtgttgccgatgtacaaggtccgtcaact
gtagtcgggggagcggtcgtccgcatacggaaaacgagaacaaagcagggtgaagaaatg
gcgtttttcaccgtcggcgatgagagcggggaattggaggcggtggcgtttccgaacgtt
taccgccgcgcggcggacatattgaaagaagggcagtttgtattgcttgccggaacgatt
gaggtgcgcggcggacggcgtcagctcatcatccgccgggccgaacgcttgacggcgtcg
gcgttgtatatcgacgccagccgccaagacaaggcgcgtcttgccgcgctgaagccgctg
ttggaacgacaccaaggccgcactccggtgtatttgtacgatgaagcgaagcgaaagctt
ctccgtcttcccgagcggtatgcggccgatctcaccgccccgcttgtcgatgaactgctt
tccttgttcagcttcggacgcgtggtcgtcaagtaa
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