Geovibrio thiophilus: EP073_00780
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Entry
EP073_00780 CDS
T05803
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
gtl
Geovibrio thiophilus
Brite
KEGG Orthology (KO) [BR:
gtl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtl03019
]
EP073_00780
03009 Ribosome biogenesis [BR:
gtl03009
]
EP073_00780
Messenger RNA biogenesis [BR:
gtl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EP073_00780
Ribosome biogenesis [BR:
gtl03009
]
Prokaryotic type
rRNA processing factors
EP073_00780
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DUF5351
Motif
Other DBs
NCBI-ProteinID:
QAR31985
UniProt:
A0A3R6AW92
LinkDB
All DBs
Position
167357..168883
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AA seq
508 aa
AA seq
DB search
MSREIIINSTVNECRVAVLENGSTAEIFIERAHSKNVAGNIYKGRVVKVLPGIQSAFVDI
GLSKAAFLPVADIYVENGDKVAFFEKSVDGTIEFDDLEAERRVQEFPPIQDLLREGQEII
VQVAKEAIGQKGARLTTHITVPGRYIVLMPGYEHVGVSRKIEQDEERERLRQILKDTKPK
GMGLIARTVSADRSYEEIKSDFEYLLRLWTKIQERMTRSGAPALVYEDHDLIFRILRDVV
NEKVSRIIIDNKADYLKMKTFLREYMPDLHVEVALYEHELPVFDHYNIEIEINRILDKKV
WLKSGGYIVIDQAEALTVIDVNTGRFVGKRNFEETILKTNLEAAKEIAWQLRLRNIGGII
IVDFIDMSRDENKEKVLVSLEGELKGDRAKCSVVNISPLGLVEVTRKRVQESLTRTLSEP
CPYCEGRGIVKSKLTVCYDILREIRRIAPYFKNKRILVEAHPDVVDLILNDEKESLDEIE
LMMSVTIEVNPSEDFHIEHYDVVPVSKE
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtccagagagataataataaattcaacggtaaatgaatgccgtgtggctgtgctggaa
aacggaagcacggctgaaatattcatagaacgcgcccacagcaaaaatgttgcgggcaat
atatacaaaggcagggtggttaaggtgcttccgggcatacagtccgccttcgttgatatt
ggcttaagcaaggcagcctttcttcccgtcgcggatatttatgtggaaaacggggataag
gtggctttttttgaaaaaagcgtggacggcacaatcgagtttgatgatcttgaggctgag
cgccgcgttcaggaattcccccccattcaggatcttctgcgtgaagggcaggagataatc
gttcaggtcgccaaggaagccatagggcagaaaggcgcccgccttaccacgcatataacc
gttcccgggcgctatatcgtcctcatgcccggttatgagcatgtgggtgtttcccgcaag
atagagcaggatgaggagcgtgagcgcctccgccagatactcaaggataccaagccgaag
ggcatggggctgatcgcccgcacggtctccgctgaccgcagctacgaagagataaagagc
gattttgagtatctcctgcgtctctggacgaagattcaggagcggatgacccgctccggc
gcgcccgcccttgtatatgaggatcatgatcttatcttccgcatactccgtgatgtggtt
aatgagaaggtcagccgcatcatcatagacaacaaggcggactatctgaaaatgaagacc
ttcctgcgggaatatatgccggatctccatgtcgaagtggcgctctatgaacatgagctg
cccgtttttgaccattacaacatagagatagagatcaaccgcatactggacaaaaaagta
tggctgaaatccggcggttatatcgtaatagatcaggcggaagcgctcaccgtgatagac
gtgaacaccggacgttttgtgggcaagcgcaactttgaggaaaccatactgaaaaccaac
cttgaggcggcaaaagagatagcatggcagcttcggctccgcaatatcggcggtataata
atcgtggatttcatagatatgagcagggacgagaacaaagaaaaagtccttgtctctctg
gaaggcgagcttaagggcgacagggcgaaatgctccgtggtgaacatctcccctctcggc
ttggtggaggtcacaagaaagcgtgtgcaggaaagcctcacacgcaccctcagcgagccg
tgcccctactgtgaagggcgggggatagtgaagtccaagctcactgtctgctatgacata
ctccgtgaaatacgccgcatagcgccctacttcaaaaataaaaggattctcgttgaggcg
catcccgatgttgtcgacctgatactaaacgacgaaaaggaaagccttgatgaaatagag
ctcatgatgagcgtgacaatagaggtcaatcccagtgaggacttccacatagagcattat
gacgtggttccggtcagcaaggaataa
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