Geovibrio thiophilus: EP073_04525
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Entry
EP073_04525 CDS
T05803
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gtl
Geovibrio thiophilus
Pathway
gtl03420
Nucleotide excision repair
gtl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gtl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EP073_04525
03430 Mismatch repair
EP073_04525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gtl03400
]
EP073_04525
Enzymes [BR:
gtl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EP073_04525
DNA repair and recombination proteins [BR:
gtl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EP073_04525
MMR (mismatch excision repair)
Other MMR factors
EP073_04525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_11
UvrD_C_2
Viral_helicase1
Methyltransf_23
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QAR32698
UniProt:
A0A410JXB7
LinkDB
All DBs
Position
973524..975473
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AA seq
649 aa
AA seq
DB search
MAVEITSGDIFANEQLNKHAKIYAGPGAGKTHFLVENVKHIVTTYPLVAQSHQRKVLCVT
YTNAAVDEIKRRLDRYADSVEVYTIHGFIIEHIINPFQQDLRQIMQDDFGIIVSEKGQIT
SQVEGLGILHGVDKDEIFQYILDITDETNKPEYSKKIMGDVCIDIGTYNSDPDGFASKNM
NKKFHASSRIAEEHILPIKEYVWSIVRKLTHNEILYFGYRILEKNHTALYATRVRFPFIF
VDEFQDTNPLQTKLIKMIGHKSTVLGIIGDLAQSIYSFQGAKPSQFAGFALESDRELIEY
VVNGNRRSTVNIVNFCNYLRQSDANVSQISIKTYADDTVRQQTESKKIHFIIGSGDAEMR
HIARIVADGGVVLTRTWAAAFEYINEVTQPQVQSLREIYNSYYTSPIDIRRDIEEHGYVT
WVRAFRFIFSLWNGFRTGSFVDVLRAISYYRPIEPKLITPKLISQIKKLSSSIFEALSDF
TIDKTTVNVIGDFNTKTADPQFSEIISILGSDFKIPVFDEADREDLKNNVSSLNWQTSYK
LFTEVFSAGSKYMTVHQAKGLEWKSVVVSLKPNPRSNMDNITLERMFSNPQLLAEDSAQE
FTRMYYVACSRAKEDLYIHLPSDFNQSIIESALNSFSIKSGHNIDYEFL
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgaaataacttccggcgatatttttgctaatgagcaactcaataaacacgcc
aagatttatgctggcccaggtgcaggtaaaacacatttcttggttgaaaatgtaaaacat
attgtaacaacttacccactagtggcacagagccatcaacgaaaggtactatgtgtaact
tatactaatgctgcggttgatgaaataaagcgtcgcttagatagatatgccgattctgtg
gaagtgtatacgattcatggttttattattgaacatatcatcaatccatttcaacaggat
ttaaggcaaataatgcaagacgattttggaataatcgtaagcgaaaagggtcaaattact
tcacaagtagaaggtttgggaatattgcatggcgtcgataaagatgaaatattccaatat
attcttgatatcactgatgaaacaaacaaaccagagtacagcaaaaaaattatgggggat
gtctgtatcgatattggtacttacaacagcgatcccgatggatttgcctcaaaaaatatg
aataaaaaatttcatgcatcgtcccgaatagctgaagaacatatattgccgataaaagag
tatgtctggtcaatcgttagaaaattgacacataacgagatactatattttgggtatcgg
atcctcgaaaagaatcatactgcactctatgcaacaagagtcaggtttccttttattttt
gttgatgaatttcaggatacgaaccctctgcagacaaaactgattaaaatgatcggtcat
aaatctaccgtgcttggcatcataggtgatttagcacaatctatctatagctttcaagga
gctaaaccgtcgcaatttgcaggatttgcactagagagcgatagagaactaattgaatat
gttgtcaatggaaatagacggtctactgttaacattgttaacttttgtaattatcttcgg
caatctgacgcaaatgtatcgcaaataagcataaagacatatgccgatgacaccgtaaga
caacaaacggaatctaaaaaaattcacttcattattggaagtggtgatgcagagatgcgt
catatcgcacgaattgttgctgatggtggtgtagtattgacaagaacatgggcagcggca
ttcgaatatatcaatgaggtgacacaacctcaagttcaaagccttcgcgaaatttacaat
agttattatacttcaccgattgatattcgacgagacatcgaagaacatggttatgtaact
tgggttagagcattcagatttatctttagtctatggaatggatttcgtaccggttcgttt
gttgatgtattacgagctatttcgtattacagacctatcgagccaaagttgattacccca
aagttaatttctcaaatcaagaagctctcttcctctatctttgaagctctttcagacttc
acaattgataaaaccacggtaaatgttattggagatttcaacactaaaactgcagatcca
cagttttcggagattatcagcattttgggttctgatttcaaaattcctgtatttgacgaa
gccgaccgagaagatttgaaaaataacgtgagcagtctaaattggcaaacatcttataaa
ctgtttacagaagttttctctgcaggtagcaaatatatgactgtacaccaagctaagggg
cttgaatggaaaagcgtagttgttagtttaaaaccaaacccgcggagcaacatggataat
atcacgcttgaaagaatgttctcaaacccgcagttgttagctgaagattccgcgcaagaa
tttactcgtatgtattatgttgcttgtagccgtgcaaaagaagatttatacatacatttg
cccagcgattttaaccaatccatcattgaaagcgctttgaatagtttctcaataaaaagt
ggacataatattgattatgaattcctataa
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