Geovibrio thiophilus: EP073_07910
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Entry
EP073_07910 CDS
T05803
Name
(GenBank) retention module-containing protein
KO
K20276
large repetitive protein
Organism
gtl
Geovibrio thiophilus
Pathway
gtl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gtl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EP073_07910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_4
Big_9
Cadherin_5
VWA_2
DUF4114
bMG6
vWA-TerF-like
CshA_repeat
fn3_3
DUF7354
PA14
Y_Y_Y
Motif
Other DBs
NCBI-ProteinID:
QAR33327
UniProt:
A0A410JYS0
LinkDB
All DBs
Position
1666262..1675138
Genome browser
AA seq
2958 aa
AA seq
DB search
MAQAGTIKSISGTVTAQSADGQVRSLGVGDIVFENEIIQTGIGGAVVIVLADNKEISLGE
NAEMMLDETVIASVEGDDASVSDVEALQAALEAGENIDEIEEETAAGEEDQFQFLASYYG
GDDTEGQVGTYLLDAADDEGGPDAPDEDGAGNADPVAADDAIIMDEDGVFTGQLPAATDT
DGDNVIYAVGTPPVNGILVINPDGSYTYTPNPNYNGPDSFTYVIDDGNGGTVTYTVDIIV
NPVNDVPVLTGDEGDVVEDVTTSVSGQVTIEDIDEGESFFRPSELTGEYGSFVLDANGNW
TYTLNNDVVQSLPEGATLTESFEVVSLDGTATETVTITITGTNDVPVITGEATGNVVEDG
ETLLTSGKLDIVDVDEGESSFQPTEQEGSYGSFAMDENGNWTYQLNNENGAVQALPAGVT
LTETFEVISFDGTATETVTITITGTNDVPVITGVASGDVVEDGEVLFTSGKLDIVDVDTG
ESSFQPAEQAGEYGSFAMDENGNWTYTLNNEAVQFLPEGVTRTETFEVISFDGTATETVT
ITITGTNDVPVITGEASGDVVEDGEVLFTTGKLDIADADEGESSFEPSEQTGIYGSFAMD
ENGNWTYTLNNENSDVQALPAEATLTESFVVYSFDGTATETVTVTITGTNDVPVISGDNS
GDLVEDVTLTAAGKLDIADVDTGESFFQPSQQSGQYGSFVMDENGSWTYELNNQAVQSLP
AGATLTEEFEVLSLDGTASETVVVTITGTNDVPEISGDKKGTVYEDGEVLFTSGKLDIED
IDEGESYFRAQEDTAGRYGTFSVDENGNWVYDLNNDAVQYLPEGAKLKETFTVVSLDGTA
TQKVTVTIVGTNDVPVISGKDEGYVTEDQDVFFGRLITGGMLAIDDADLLQDFFKPEIVS
GDYGTFTVGPLGVWTYTAANGSAAIQSLPEGATLTETFTVTSIDGSATHEVTVTITGTND
VPIISGQDSGTVTEDSNFLFLSTNGKLDIVDVDTGESSFKSSQQVGKYGAFVMDEDGNWK
YTALNLHPSVQSLPAGATLTEEFTVESFDGTATETVTVTIVGTNDVPLMIGDFKGTAVED
VKLGTSGRVFVLDIDTGESSVIPVSDEEGTYGKFNIDANGNWTYELDNDNAVVQALPAGA
KVTDTFEVTSFDGTVTKTVTVTITGTNDQPEVEDVSKVVFEDGRVIDGQLEVTDVDTGDT
HTFALVDDAPDGFTLNSDGSWSFDPDNDAYDSLAKGDVLVLKIPYTATDDSGALNAESEE
GMITIKVIGTNDRPEVEDVEFGVYENGAKYTGQLDVTDVDEGDNHIFLPASKLPAGFILL
PNGEYSFNPSNPAYESLREGEEITLTVKYVAVDDSFSLNSISETGTITITVTGTNDQPCV
KDVFKTVYEGGNEISGQVQAHDIDSGDTHTFALVDDAPAGFTFNSDGTWSFDPADSAYDS
LAKGEILVLKIPFTATDDSGSVNAESDEGYITIKIKGTNDAPVIDLEADTAKTTITYDSQ
SAGFDNAIGVYWLDENGDPVDPQIILDGSQNTDFGEIFSMDSLPGNIQFFIIADGASIVD
GSTVLSFDENGKLLINGEESSKPVYYSEDGKNPEGLQYVSITDNGDGTSTIEFEDQTDED
FNDVVLTLTAASFSEGTGYETTYVENAEPVSIASETVEITDVDDTNIESAVIRLTNAFEG
DFLSVGTLPSGIDYEISSDGTTVTLTGSATLADYQEAIKAIGFASESENPATDDRYVEVT
VNDGDANSNTAVTVVKVVPVNDAPVAVDDSIEVEEDGSKTFGVLGNDYDVDGDDISIDEF
TQPAHGTVTLNQDGTFTYVPDDNYNGEDSFTYTIADPDGETSTATVNINVTPVNDAPVAT
DDGRPNFSFTSLAGNYYAVSTEFNGLNGSTYNNDNGYLIDNLNEFKHIVDTTDPVASFDA
TKIWYGYGTGSVSQGNNLAGFLNQDGDSLSYNGGQVVNSDEGGFHVSGKVYIEAGTYNFK
VYADDGYDILIDGESVAKFENNQSPATHVHDSFTIEESGWYDIDMYWWDQGGEYVFQPSI
SDDGGLTYTLLTNEGTYVTDEDTAIDFDASDLLDNDFDVDGDDLTIIGVGSAVNGEVVLN
DDGSVTFTPDADYNGPAQFEYTISDGNGGEDTATVYLVVSPVNDAPVAADDEISLDEGDV
FEGALPEAFDADGDDVSYSLKTPAGNGTVEINEDGSYTYTPNDDFSGEDSFEYTVDDGNG
GTNSYTVSITVNDTNDVPVAQDDFAGLEEGVSTSGTVNLVLVLDTSTSMNDMVGGKTRLE
IAKAALNNLIDKYGDSLGSVMLVDFNDKATLYTIDGEKWLTGDQAQTAINGLTTKNYTDY
DHAIEVVRTSYTDAPEADKTYVYFLSDGEPMGSDGSNQNTISNGERETWTNFLNSSDIDE
VFAVGVGSGVSTTNLETVAWTSDPDGDHSGNVIPVTNENQLSAILEGTVELNSVEGNLLD
NDDFGDDGAGTPQLVSVEYNGVTVEFDSSTTQHTFDLGEAGKVTIYSDGKYEYTSGADVA
EDATAEIKYVIQDADGETSEATLTLTTEDRSEVFAADNANHAIINEVTVDEIVNETDIKF
GSNSTKVLTDDDDATSDRFDVSVGSGQTAEVSFNYLVENVNNQNDTFEWTLQKYDGSGSY
DYSSNWDDVEDGTVKVNGNGTVTIDNLSSGKYRLVFYTDDRGSGTDLKVTVSSIVLAVVT
AGYTYLEAVAAEGNVLTDANNYLDSDDQWGAVDDMGSEGAAFTVFNGTDYVAPDAAGTTI
AGDYGTLVIKADGSYSYTPADADGAGQSETFEYKLTQPDGDSDTAQLVISIGSEALHEIY
GTDGADTITFDPTADLIDAGAGYDTLIIGGGELDFSNIADVVRNIEEIDLTDGDNTLNNL
TLQDVLSITDEDNALVIRGNEGDFVTIDNSDGAFAVDGDNLVVNDGSANISFEGNVSFEV
TDTHIKVTFTDDGTEIGG
NT seq
8877 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggcaggaacaattaaatcaatcagcggaacggtaacggcgcagagcgcagac
ggtcaggtccgctcactcggcgtgggtgacatagtttttgaaaacgaaatcatccagacg
ggaatcggcggcgcggtagttatcgtgcttgctgacaacaaggaaatatcactcggtgaa
aatgctgagatgatgcttgacgaaacagttatagcctctgttgaaggcgatgacgcgtca
gtttcagatgttgaggctcttcaggctgcacttgaagcaggcgaaaacattgatgagatt
gaagaagaaacagccgcaggtgaggaagaccagtttcagttcctcgcatcctactatggc
ggtgatgacaccgaaggtcaggttggcacataccttcttgatgctgcggatgatgaaggc
ggacctgatgcccctgatgaagacggcgcaggcaacgcagaccctgttgcggctgacgat
gcaataattatggatgaagacggtgtgttcaccggtcagcttcccgctgctacggacact
gacggcgataacgtaatctatgctgtgggaactccccctgttaacggtatactcgttatc
aatccagacggctcctacacctacacccccaaccccaactacaacggtcccgacagtttc
acttatgtaattgatgacggaaacggcggaacagtcacttacacagttgatataattgtt
aatcctgttaacgatgtacccgtgctcacaggcgatgaaggcgatgttgtcgaagacgta
accacatctgtaagcggtcaggtgactatagaagacatagacgaaggcgaaagctttttc
cgcccttccgagcttacaggcgagtatggctcattcgtgcttgacgcaaacggcaactgg
acatacaccctcaacaatgacgttgtacagtccctccccgaaggcgccacacttacggaa
tcttttgaagttgtctcccttgacggcacagcaactgagacagtgactatcacaataaca
ggcactaacgatgtacctgtgataacaggcgaagcaacaggtaatgttgttgaagacggc
gaaacccttttaacttccggcaagcttgatatagttgatgtggatgaaggcgaaagctca
ttccagcctaccgagcaggaaggcagctacggctcattcgcaatggatgagaacggcaac
tggacttatcagctcaacaacgaaaacggtgctgttcaggcactgcccgccggtgtgaca
ctcacggaaacatttgaagtaatatcctttgacggcacagcaacagagacagtgacaatc
acaatcacaggcacaaatgatgtacctgtaataacaggcgttgcatccggcgatgttgtt
gaagacggcgaagtccttttcacttccggtaagctcgatatagttgatgtggacacaggc
gaaagctcattccagcccgctgagcaggcaggagaatacggctcattcgcaatggatgaa
aacggcaactggacttacaccctcaataacgaagctgttcagtttctccccgaaggtgtg
acacgcactgaaacatttgaagtaatatcctttgacggcacagcaacagagacagtgact
attacaatcacaggcactaacgatgttcccgttataaccggagaggcatccggtgatgtc
gttgaagacggtgaagtccttttcaccacgggcaagcttgatatagccgatgcggatgaa
ggtgaaagctcattcgagccctcagagcagacaggcatatacggctcattcgcaatggat
gaaaacggcaactggacatacacgctcaataacgaaaacagcgatgttcaggcactgccc
gctgaggcaactcttacagaatctttcgttgtttactcatttgacggtacagctacagaa
acagtgactgtcacaatcacaggcactaacgatgtacccgttataagcggcgataactca
ggcgatttggttgaagatgttactctcactgcggcaggcaagcttgatatagctgatgtt
gacacgggcgaaagcttcttccagccatctcagcagtccggtcagtacggttcattcgta
atggatgaaaacggcagctggacatacgagcttaataatcaggctgttcagtcactcccc
gcaggcgcaacgctcacggaggagtttgaggttctgtcacttgacggcactgcttctgaa
acggttgttgttacaatcaccggaacaaatgatgttcccgaaatatccggcgataaaaaa
ggcacagtttacgaagacggtgaagttctcttcacttccggcaagcttgacatcgaagac
atagatgaaggcgaaagctatttccgcgctcaggaagacacagcgggcagatacggcaca
ttcagtgtagacgagaacggcaactgggtttatgacctcaataatgacgcggttcagtat
ctccccgaaggcgcaaagctgaaagaaacctttacggtagtttcccttgacggcacagct
acccagaaagtgactgtaaccatagtaggcactaatgatgtgcctgttataagcggcaag
gacgaaggctatgtaaccgaagatcaggatgttttcttcggcaggcttatcacaggcgga
atgctcgctattgacgacgccgatcttcttcaggacttcttcaaacctgaaatagtcagc
ggcgactatggcacattcactgtcggaccgctcggcgtatggacttacacagcggctaac
ggcagcgcagccattcagtcacttccagagggagcaacactcactgaaacatttacagta
acctcaatagacggttccgccactcatgaagtgaccgtaaccataaccggtactaacgat
gtaccgattatcagtggtcaggatagcggcacagtgactgaagacagtaacttcctgttt
ctcagcaccaacggaaagcttgatatagtcgatgtagacacaggcgaaagctccttcaag
tcctctcagcaggtcggaaaatacggcgcgttcgtaatggacgaagacgggaactggaaa
tatacagcgctcaacctgcacccctctgtacagagccttcccgcaggagcaacactcacg
gaagaattcactgttgagtcctttgacggtactgccactgagacggtaaccgttaccata
gtcggaacaaacgatgttccccttatgataggcgattttaaaggaacggctgttgaggat
gtcaaactcggcacttccggcagagtttttgttctggatattgatacaggtgaaagctca
gtcatacccgtttctgatgaagaaggcacttacggtaaattcaacatagacgcaaacggt
aactggacatatgaactcgataacgataacgcagttgttcaggcacttcccgcaggcgct
aaagttaccgatacgtttgaagtaacctcttttgacggcactgttacgaaaaccgtaact
gtcaccattacaggcactaacgatcagcccgaagtcgaagatgtttccaaagtcgtattt
gaagacggaagagttattgacggacagcttgaggtaacagatgttgatacgggtgataca
catactttcgctcttgtggatgatgctcccgacggcttcactctgaactcagacggctca
tggtctttcgaccctgataacgatgcttacgacagcctcgcaaaaggcgatgtacttgtg
cttaagatcccatacactgccacagatgattccggcgccctcaatgccgaatcagaagaa
ggcatgataaccatcaaggttataggcacaaacgacagacccgaagttgaagatgttgag
ttcggcgtatacgaaaacggcgcaaaatacaccggtcagcttgatgtgacggatgtggac
gaaggcgacaaccatatcttcctgcccgcaagcaaactgccagcaggctttatactgctg
cccaacggcgaatacagcttcaatccttccaaccctgcgtatgaaagtctgagagaaggc
gaagagataaccctcacagtgaaatatgttgctgttgatgattcattctccctcaactcc
atttccgagacagggacaatcacaatcacagtgacgggaacaaacgatcagccttgcgtt
aaagacgtatttaaaactgtttacgaaggcggaaacgaaatcagcggacaggttcaggct
cacgacattgacagcggcgatacgcataccttcgctcttgttgacgatgcgcccgcaggc
ttcacattcaattcagacggcacttggtcatttgacccggcagactctgcgtatgacagt
ctggcaaaaggagaaattcttgtactcaaaatacccttcactgccacagacgactcaggc
tcagttaacgccgaatctgacgaaggctacatcacaatcaagatcaaaggcactaatgac
gcgcccgtaatagatcttgaagcagacacagccaaaacaaccatcacctacgactctcag
agcgcaggatttgataacgctatcggcgtttactggctggatgaaaacggcgaccccgtt
gatccgcagataatactcgacggttctcagaacactgatttcggcgagatattctctatg
gacagtctgcccggtaacattcagttcttcatcattgctgacggcgcgtccatcgtggat
ggaagcactgtcctcagctttgacgaaaacggcaagctcctcatcaacggtgaagagtct
tccaaaccggtttactacagcgaagacggtaagaaccccgaaggtctccagtatgtcagc
attactgacaatggtgacggtacaagcacaatagaatttgaagaccagaccgacgaggac
ttcaatgacgtggtgctcacactgacagcggcatccttcagcgaaggcacaggctatgaa
acaacttacgttgaaaacgctgagcctgtttctatcgcgagcgaaacagttgagataaca
gatgtggacgataccaatatcgaaagcgcagttatcaggcttaccaacgcgtttgaaggc
gatttcctttcagtgggtaccctcccctcaggaatcgattatgaaatcagctccgacggc
acaactgtcactctgacaggctccgccacactggcagactatcaggaagcgatcaaggca
atcggtttcgcaagcgaaagcgaaaaccccgcaacagatgaccgttatgttgaagtaaca
gtaaatgacggtgacgcgaacagcaataccgctgttacagttgtcaaagttgttcctgtt
aacgatgcgcccgttgcagttgatgattctatcgaagtagaggaagacggttctaaaacc
ttcggcgttctcggcaacgactatgatgtggacggcgatgatatatccatcgatgagttt
actcagcccgctcacggtacggttacgctcaatcaggacggaacattcacttatgttccc
gatgacaactacaacggtgaagacagcttcacttacacaattgccgatccggacggtgaa
acaagcacagctacggttaacatcaatgttacacctgtgaatgatgctcctgtagccact
gatgacggcagaccgaacttcagcttcacaagccttgcaggtaactactatgctgtgagc
acagagtttaacggtttgaacggcagcacatacaacaatgacaatggctatctgatagat
aacctgaacgaatttaaacacatagtcgataccaccgatccagtggcatcatttgacgcc
acaaaaatctggtacggctacggcacgggaagtgtttctcagggcaataaccttgcagga
ttcctcaatcaggacggcgattctctcagctataacggcgggcaggtcgtaaactctgat
gaaggcggcttccatgtcagcggtaaagtgtatatagaagcgggcacttacaacttcaag
gtttacgctgatgacggctatgacatactcatagacggcgaaagcgtagcgaagtttgaa
aacaaccagtcacccgcaacccacgtacacgattccttcacaattgaagaaagcggatgg
tacgacattgatatgtactggtgggatcagggcggcgaatatgtgttccagccttcaata
agtgatgacggcggacttacatacacccttctgaccaacgaaggcacatacgtgactgat
gaagacacagccatcgatttcgatgcgtctgacctgcttgacaacgactttgacgtagac
ggcgatgacctcactataatcggtgttggcagcgcggttaacggagaagttgttctcaac
gatgacggaagcgtgacattcactcctgacgctgactacaacggtcccgctcagtttgaa
tacaccatttcggacggcaacggcggagaagacacagcaacggtttaccttgtggtttca
cctgttaacgacgcgcccgtggcagcggatgatgaaatatcccttgacgaaggcgacgtt
tttgaaggcgcactccccgaagcgtttgacgcggacggtgatgatgtttcctactcgctt
aaaacacctgccggaaacggtacagtggaaatcaacgaggacggttcatatacctacacg
ccgaacgatgatttcagcggtgaagacagctttgaatacactgttgacgacggcaacggc
ggaacaaactcatacactgtaagcatcacagtgaatgacacaaatgatgttcccgtggct
caggatgactttgccggtcttgaggaaggcgtttctacctccggcactgtgaaccttgtc
cttgtgcttgatacttcaacaagcatgaatgatatggtcggtggcaagacaagacttgaa
atcgctaaagcggctcttaacaaccttatcgacaaatacggcgattctctcggcagtgta
atgctcgttgactttaatgacaaagcaactctttacacaatagacggcgaaaaatggctt
accggagatcaggctcaaactgctataaacggtctgacaacgaagaactataccgactat
gaccatgctatagaggttgtgagaacctcctacaccgatgctcctgaggctgataaaact
tatgtttacttcctctcagacggtgagccgatgggaagcgacggaagcaaccagaacact
ataagcaacggtgaacgcgaaacatggactaacttcctcaacagttcagacattgatgaa
gtttttgcagtgggagtaggttccggcgtaagcacaacaaatcttgaaactgttgcatgg
acaagcgatccggatggtgaccacagcggtaacgtgataccggttacaaatgaaaatcag
ctctcagctatacttgagggcactgttgaactcaactctgttgagggcaatctgcttgat
aacgatgacttcggtgatgacggagcagggactccccagcttgtatctgttgagtacaac
ggagtgacagtggagttcgattcctcaacaacccagcatacctttgacctcggcgaagca
ggcaaggtaacaatctacagtgacggcaagtatgaatatacttccggagcggatgtcgca
gaagacgcaactgccgaaatcaaatatgttattcaggatgctgacggcgaaacatccgaa
gctacgcttaccctcacaactgaggacagaagcgaagttttcgcggctgacaacgctaac
cacgcaataataaacgaagtgacagtggatgagattgttaacgaaaccgatataaaattc
ggcagcaactcaaccaaagtcctcacagacgatgatgatgccacaagcgataggtttgat
gtttcagtaggaagcggtcagactgctgaagtaagcttcaactatctggttgagaacgtc
aataaccagaatgatacttttgagtggacgcttcagaaatacgacggttcaggttcctat
gactacagcagcaactgggacgatgttgaagacggcactgtcaaagttaacggaaacgga
actgttaccatcgacaacctctcatcaggaaaatacagactcgtattctacactgatgac
agaggcagcggaacagaccttaaagtgactgtaagcagtatagtgcttgctgttgtgaca
gcagggtatacttaccttgaagctgttgcggcagaaggcaatgttcttacggatgccaac
aactacctcgacagtgacgaccagtggggcgctgtggatgatatgggctccgaaggcgct
gcattcaccgtatttaacggaaccgattatgtcgcacccgatgcggcgggaaccacaatt
gcaggagattacggaacgctggtaataaaggcagacggttcatactcctacacccctgct
gacgcagacggcgccggtcagagcgaaacttttgagtacaaactcactcagcctgacggc
gacagcgacactgctcaactcgtgataagcataggcagcgaagctcttcatgagatttat
ggtactgacggcgcggatactatcacattcgacccgactgctgacctcatagacgcaggc
gcaggctacgatactctcataatcggcggcggcgagcttgatttcagcaacatagctgat
gttgtaaggaatattgaagaaatagaccttacagacggcgacaacaccctgaataacctt
actcttcaggatgtgctgagcattacagatgaagacaatgctctggttatcagaggaaac
gaaggcgactttgtaaccatcgataactcagacggcgcgttcgcagtggacggcgataat
ctggtagttaatgacggcagcgccaacatcagctttgaaggcaacgtaagctttgaagtg
acagatactcatatcaaagtcactttcactgatgacggtaccgaaataggcggataa
DBGET
integrated database retrieval system
