Geovibrio thiophilus: EP073_08965
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Entry
EP073_08965 CDS
T05803
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
gtl
Geovibrio thiophilus
Pathway
gtl00540
Lipopolysaccharide biosynthesis
gtl01100
Metabolic pathways
gtl01250
Biosynthesis of nucleotide sugars
Module
gtl_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
gtl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
EP073_08965 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
gtl01005
]
EP073_08965 (rfaD)
Enzymes [BR:
gtl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
EP073_08965 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
gtl01005
]
Core region
EP073_08965 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
KR
Motif
Other DBs
NCBI-ProteinID:
QAR33526
UniProt:
A0A410JZA4
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All DBs
Position
complement(1905027..1905968)
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AA seq
313 aa
AA seq
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MIVVTGGAGFIGSNIVKGLNDMGEDNIIIVDSLDNPAKHLNLNKLKYNDFIDKRDFLSVL
KEDRFFIKVFFHEGACSNTMETDGRYMMRNNYEFSKELLHYSMERGARFIYASSASVYGN
GDEGFAESPECEYPLNVYAFSKFSFDNYVRRIKNAGTQVAGLRYFNVYGPQENHKGKMAS
VAFHFFSQHKEGTKVKLFEGSEDFRRDFIHVNDVVAVNMFLYENSNVSGIFNCGTGKSRS
FADIAEVFRTRYGKAFESEIIPFPEQLKGKYQKYTQADLINLRKAGYANEFLTLEQGVGA
YLEVLEMTGGYIK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatagttgtaacaggcggagcaggatttatagggagcaacatagtaaaaggactgaac
gatatgggtgaggacaacattatcattgtcgacagccttgataatcccgcaaagcatctg
aacctgaataagcttaaatacaatgattttattgataaacgggattttctctctgttctc
aaagaggacaggtttttcataaaagtatttttccatgaaggcgcctgctccaacacaatg
gaaacagacggcagatacatgatgcggaacaactacgagttcagcaaggagctcctgcat
tacagcatggaacggggagcaagatttatttacgcttcctctgcttctgtttacggcaac
ggggatgaaggcttcgccgaaagccctgagtgtgagtatccgctgaatgtttacgccttc
tccaaattttcgtttgataattatgtccgcaggataaaaaatgccggaacacaggtcgcc
ggactgcgctatttcaatgtctacggtccgcaggaaaaccacaaaggcaagatggcttcc
gtggcttttcacttcttcagccagcacaaggaaggcactaaggtgaagctttttgaaggg
agtgaagatttccgcagagacttcattcacgtcaatgacgttgtggcggtaaatatgttc
ctctacgaaaactccaatgtctcaggcatattcaactgcggcacaggaaaatccagaagc
ttcgccgacatagccgaagttttcagaacaagatacggcaaagcttttgaatcagagata
attccttttcctgagcagcttaagggaaaatatcagaaatatactcaggctgatctcatt
aatctgagaaaagccggatatgccaatgagtttctcactctggaacagggtgtgggagct
tatcttgaggttctggaaatgaccggcggttatataaaataa
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