Geovibrio thiophilus: EP073_09335
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Entry
EP073_09335 CDS
T05803
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
gtl
Geovibrio thiophilus
Pathway
gtl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gtl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EP073_09335 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtl03019
]
EP073_09335 (rny)
Messenger RNA biogenesis [BR:
gtl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EP073_09335 (rny)
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
ATP-synt_B
Motif
Other DBs
NCBI-ProteinID:
QAR33596
UniProt:
A0A410JZH6
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Position
complement(1977413..1978972)
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AA seq
519 aa
AA seq
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MSSLHALLVLVSLMTGIFAGLLYQKRKNDNENIRNSKTAEDILSRARKEADEITKEAKLE
AKDYVYKGKQEVERDSREKKKEIAALEKRLMTKEESIDGKLDQLTRKEDALLKKYEEAEE
KQKVLDKLREEAEEIRNRMIAEIEKIAAMTREEAKQMLISELVEDAKIDAARELREIEEQ
TKMDAEKKAQSIIATAIQRCAPEYVGEISVSVVSLPSDEMKGRIIGREGRNIRTFESVTG
VDIIVDDTPEAVILSSYDPFRREIAKMTLERLVTDGRIHPARIEELHDKCREELEKHVLE
VGEQTLFDLGIHGVHKDISRLIGRLKYRTSYGQNVLGHSIEVAKICGTMAAELGLNEKIA
KRAGLLHDIGKAIDYESEGSHTEIGLEVAKKYKEDWRVLNAIASHHGEEEFKCVESVLVQ
AADAMSASRPGARREVLESYLKRLENLETIASSFEGVSKCYAIQAGREVRIIVEPDKVTD
ERLVTLSKDISKKIEEELTYPGQIRVTVIREARSVGYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtctgcatgcgttactcgtcctcgtgagccttatgacaggtatattcgcggga
cttttatatcagaaaagaaagaatgataatgagaatatcagaaacagcaaaacagccgaa
gacattttaagcagagccagaaaagaagctgacgaaataaccaaggaagcaaagcttgaa
gccaaggactatgtctataaaggtaaacaggaagttgaaagagactccagagaaaagaaa
aaagagatagccgcacttgaaaaacggcttatgaccaaagaagaatccatagacggcaag
cttgatcagcttaccagaaaggaagacgctcttcttaagaaatacgaggaagcggaagaa
aagcagaaagttctcgataagctccgtgaggaagccgaagagatccgcaacagaatgata
gccgaaatcgaaaagatagccgctatgacaagggaggaagcaaaacagatgcttatctcc
gagcttgttgaggatgctaaaatcgatgctgcgcgtgagctcagggaaatcgaagagcag
accaaaatggatgctgagaaaaaggcgcagagcatcatcgcgacagctatccagagatgt
gctcccgaatatgtgggcgagatttcagtctctgtggtcagcctccccagtgatgagatg
aagggaagaatcatcggacgtgaaggaagaaacatccgtacgtttgaaagcgttaccgga
gttgatataattgtggatgacacccccgaggcggttatcctttcatcctacgaccctttc
agaagagagatcgccaagatgacccttgaaaggctcgtgaccgacgggcgcatacatccg
gcgagaattgaggagcttcacgacaaatgccgtgaggagcttgagaagcatgttcttgag
gttggtgagcagaccctctttgatctcggcatacacggtgttcataaagacatttcaagg
cttatcggcaggctgaaatacagaaccagctacggacagaacgttctcggacattccatc
gaagtggcgaaaatctgcggaacaatggcagccgaactcggactgaacgagaaaatagcc
aaacgtgccggtcttctccatgacataggaaaggcgatagactacgagagtgaaggctca
cacaccgaaatcggtctggaagtggcgaagaaatacaaagaggactggcgcgtgcttaac
gccatagcctctcaccacggcgaagaggagttcaagtgcgttgagtctgttcttgtgcag
gctgcggacgctatgagcgcatccagacccggcgcgaggagagaggttcttgaatcatac
ctgaaaaggcttgaaaatcttgaaaccatcgcctcctcatttgaaggcgtcagcaaatgc
tacgctattcaggcgggaagagaagtgcgcataatcgttgagcccgacaaagtgaccgat
gaaaggctcgtgacgctttccaaagacatttccaaaaagatagaggaagaactcacatat
cccggacagatcagggttaccgtaatcagagaagcccgctctgttggatacgcgaaataa
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