KEGG   Geovibrio thiophilus: EP073_09335
Entry
EP073_09335       CDS       T05803                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
gtl  Geovibrio thiophilus
Pathway
gtl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gtl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EP073_09335 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gtl03019]
    EP073_09335 (rny)
Messenger RNA biogenesis [BR:gtl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     EP073_09335 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD ATP-synt_B
Other DBs
NCBI-ProteinID: QAR33596
UniProt: A0A410JZH6
LinkDB
Position
complement(1977413..1978972)
AA seq 519 aa
MSSLHALLVLVSLMTGIFAGLLYQKRKNDNENIRNSKTAEDILSRARKEADEITKEAKLE
AKDYVYKGKQEVERDSREKKKEIAALEKRLMTKEESIDGKLDQLTRKEDALLKKYEEAEE
KQKVLDKLREEAEEIRNRMIAEIEKIAAMTREEAKQMLISELVEDAKIDAARELREIEEQ
TKMDAEKKAQSIIATAIQRCAPEYVGEISVSVVSLPSDEMKGRIIGREGRNIRTFESVTG
VDIIVDDTPEAVILSSYDPFRREIAKMTLERLVTDGRIHPARIEELHDKCREELEKHVLE
VGEQTLFDLGIHGVHKDISRLIGRLKYRTSYGQNVLGHSIEVAKICGTMAAELGLNEKIA
KRAGLLHDIGKAIDYESEGSHTEIGLEVAKKYKEDWRVLNAIASHHGEEEFKCVESVLVQ
AADAMSASRPGARREVLESYLKRLENLETIASSFEGVSKCYAIQAGREVRIIVEPDKVTD
ERLVTLSKDISKKIEEELTYPGQIRVTVIREARSVGYAK
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgagcagtctgcatgcgttactcgtcctcgtgagccttatgacaggtatattcgcggga
cttttatatcagaaaagaaagaatgataatgagaatatcagaaacagcaaaacagccgaa
gacattttaagcagagccagaaaagaagctgacgaaataaccaaggaagcaaagcttgaa
gccaaggactatgtctataaaggtaaacaggaagttgaaagagactccagagaaaagaaa
aaagagatagccgcacttgaaaaacggcttatgaccaaagaagaatccatagacggcaag
cttgatcagcttaccagaaaggaagacgctcttcttaagaaatacgaggaagcggaagaa
aagcagaaagttctcgataagctccgtgaggaagccgaagagatccgcaacagaatgata
gccgaaatcgaaaagatagccgctatgacaagggaggaagcaaaacagatgcttatctcc
gagcttgttgaggatgctaaaatcgatgctgcgcgtgagctcagggaaatcgaagagcag
accaaaatggatgctgagaaaaaggcgcagagcatcatcgcgacagctatccagagatgt
gctcccgaatatgtgggcgagatttcagtctctgtggtcagcctccccagtgatgagatg
aagggaagaatcatcggacgtgaaggaagaaacatccgtacgtttgaaagcgttaccgga
gttgatataattgtggatgacacccccgaggcggttatcctttcatcctacgaccctttc
agaagagagatcgccaagatgacccttgaaaggctcgtgaccgacgggcgcatacatccg
gcgagaattgaggagcttcacgacaaatgccgtgaggagcttgagaagcatgttcttgag
gttggtgagcagaccctctttgatctcggcatacacggtgttcataaagacatttcaagg
cttatcggcaggctgaaatacagaaccagctacggacagaacgttctcggacattccatc
gaagtggcgaaaatctgcggaacaatggcagccgaactcggactgaacgagaaaatagcc
aaacgtgccggtcttctccatgacataggaaaggcgatagactacgagagtgaaggctca
cacaccgaaatcggtctggaagtggcgaagaaatacaaagaggactggcgcgtgcttaac
gccatagcctctcaccacggcgaagaggagttcaagtgcgttgagtctgttcttgtgcag
gctgcggacgctatgagcgcatccagacccggcgcgaggagagaggttcttgaatcatac
ctgaaaaggcttgaaaatcttgaaaccatcgcctcctcatttgaaggcgtcagcaaatgc
tacgctattcaggcgggaagagaagtgcgcataatcgttgagcccgacaaagtgaccgat
gaaaggctcgtgacgctttccaaagacatttccaaaaagatagaggaagaactcacatat
cccggacagatcagggttaccgtaatcagagaagcccgctctgttggatacgcgaaataa

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