Geovibrio thiophilus: EP073_09680
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Entry
EP073_09680 CDS
T05803
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
gtl
Geovibrio thiophilus
Pathway
gtl02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
gtl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EP073_09680 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gtl03000
]
EP073_09680 (nifA)
Transcription factors [BR:
gtl03000
]
Prokaryotic type
Helix-turn-helix
Other families
EP073_09680 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
GAF_2
AAA_5
AAA
Mg_chelatase
AAA_2
AAA_3
nSTAND3
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QAR33661
UniProt:
A0A3R5UZN9
LinkDB
All DBs
Position
complement(2053478..2055145)
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AA seq
555 aa
AA seq
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MEKRLSYYKLLLNTIYDISLELNSKVNESAALQNVMNIMSNNLNIQNGTILIADPETGAL
LPKASHGLSRAALAEMVYKSGEGMVGKVFKYGFPIMLHDISLEPDFKDKIKRRDDEKTSF
IAVPISHGNEKIGVLAVDKHYREVVSYEAEVDILKMISALVASFMHKMTLINSEKKELIE
EKERLRSEVAVKFSVKGLVGGSKLMQEVLKKISQVCRTKTTVLIRGESGTGKEMVAKAVH
YSGDRAQKPFVAVNCAAIPKELIESELFGYKKGAFTGAIADKKGKFELANGGTIFLDEIG
DMPLEAQSKLLRVLQEMSIERVGGSEPTPIDVRVIAATNRNLENAVRSGDFRLDLYYRLN
VVSIFLPPLRKRREDIPELAKTALDKFNTNYGTKLKISPDVFPLLMKCSWPGNIRELENC
IERAALSVTSDEITPAEFTCSRGEVCLAQLMENNGHAGCGEHAVCIESLNMDTGGEQKFF
CEHYPKAAEKPAEESVRQAKPHSEIPLAVDDEKQMVIDALEKTGWVQAKAARLLGMTVRQ
INYRIMKFGIEVKKI
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagagattaagctattataaacttctgttgaatacaatatacgacataagcctt
gagctgaactcaaaggtgaacgagagtgcggcgctccagaacgtgatgaatattatgagc
aataatctcaatattcagaacggtacaattcttattgccgatccggagacaggggcgctc
ctgccgaaggcttcgcacggtctcagcagagccgctcttgcggaaatggtgtataaaagc
ggcgaaggcatggtggggaaggtgtttaaatacggcttcccgatcatgctccacgacata
agccttgagcccgatttcaaggataaaatcaagcgcagggatgatgagaaaacaagcttt
atcgccgttcccatcagccatggaaacgagaagataggcgttctcgctgtggacaagcac
taccgtgaggtggtgagctatgaggctgaggtggatattctgaagatgatttccgctctt
gtcgcctcgttcatgcacaagatgacgcttataaacagcgagaagaaagagctgatagag
gaaaaggagcggcttcggagcgaagttgcggtgaaattctccgtcaagggtcttgttggc
ggcagcaagctgatgcaggaggtcttaaagaagatctctcaggtctgccgcacaaaaaca
acagtgcttatcagaggcgaaagcggaaccggcaaggagatggtggcgaaagccgttcac
tactccggcgaccgcgcgcagaagccctttgtcgccgtcaactgcgcggcgatcccgaaa
gagcttatagagagtgagcttttcggctataaaaaaggcgccttcactggagcgatcgcc
gacaaaaaaggcaaatttgagctggcaaacggcggaactatattccttgacgaaataggc
gacatgccccttgaggcgcaaagcaaactgctccgtgttcttcaggagatgagcatagag
cgtgtcggcggttcggagcccacacccattgacgtgagggtgattgccgccacgaacaga
aaccttgaaaacgccgtgcgttcaggagatttcaggctggatctttattacaggctgaat
gtcgtctctattttcctcccgcctctgcggaaacgcagggaggatattcccgaactcgca
aagacagcccttgacaaattcaatacaaactatggcacaaagcttaagatctcaccggat
gtattccccctgcttatgaaatgctcatggccgggcaacatacgtgagcttgaaaactgt
atagagcgtgccgccctctccgtaacaagcgatgagataacaccagccgagttcacatgc
tccagaggcgaggtctgtcttgcccagcttatggagaacaacggtcacgccggctgcggc
gagcatgcggtctgtattgagtcactcaatatggatacgggcggagaacagaaatttttc
tgcgaacactatcccaaagctgccgaaaaacccgcagaagagtctgtcagacaggctaag
ccgcactctgaaataccccttgctgtggatgatgaaaagcagatggttattgacgctctt
gagaaaacaggctgggttcaggcaaaggcagccagacttctcggcatgacagttcgccag
atcaattaccgcataatgaaattcggcatagaagtgaagaaaatataa
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