Geovibrio thiophilus: EP073_12965
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Entry
EP073_12965 CDS
T05803
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
gtl
Geovibrio thiophilus
Brite
KEGG Orthology (KO) [BR:
gtl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gtl01011
]
EP073_12965
Enzymes [BR:
gtl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
EP073_12965
Peptidoglycan biosynthesis and degradation proteins [BR:
gtl01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
EP073_12965
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Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
QAR34284
UniProt:
A0A3R5XYE5
LinkDB
All DBs
Position
complement(2802530..2803471)
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AA seq
313 aa
AA seq
DB search
MGLRKSLGVFLILTCVSCATVQPEPPSASLNMPDDDIKPFVDSPVLPEAQKKTPEPVEEP
PALRFPDTVFAAPAEEPGTPSADESVEKDHRIPPDTKMTGAVYDKPYVVRGETYHRLKYV
ETFEQEGIASWYGGPDHGRDTSNGETYNMYAMTAAHKNLPMGSMVEVENLSDGRKVTVRV
NDRGPHVEGRIIDLSKKAANEIGIKDKGLGKVKIRLLAPAGEKSADDFAPDAPNMAYAGT
VKALFAVQIASFTDKEQADALANTFGNGKVERASVRGTTYFRVKIGGFESREAAEAQKSK
MTSRYPKAFVVTE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggggcttagaaagagtcttggtgttttccttattctcacatgcgtatcctgcgcaaca
gtgcagccggagccgccttcggcttcgcttaatatgcctgatgacgacataaagccgttt
gtggattctccggttctgccagaggcgcaaaagaaaacgcccgaaccggttgaggagccc
ccggcactgaggtttcccgacacagtgttcgcggcacccgcggaagagcccggaactcct
tctgccgatgagtctgttgagaaggatcaccggataccccctgatacgaaaatgacaggc
gcagtttatgataagccgtatgttgttcgcggtgagacctaccacaggctgaaatatgtg
gaaaccttcgagcaggaaggcatcgcaagctggtacggcggtcccgaccacggacgggat
acctctaacggtgaaacatacaacatgtacgccatgaccgcagcccacaaaaacctgccc
atgggcagcatggttgaggtggaaaacctctccgacggacgcaaagttacggtaagagta
aacgacagaggtccccatgtggaaggaagaataatcgacctttcaaaaaaggcggctaat
gaaataggcataaaagacaaagggctaggaaaagtcaaaatcaggctccttgcacctgcc
ggagaaaaaagcgctgacgacttcgcgccggatgcgcccaatatggcatacgcaggaaca
gtgaaagcgctctttgccgtgcagatagcctctttcaccgataaggagcaggcggacgcg
ctggcgaacacattcggcaacggaaaggtggaacgtgccagtgtgagaggcacaacctac
ttccgtgtaaaaatcggcggatttgaaagcagagaagcggcggaagcccagaaatcaaaa
atgacctcccgataccccaaggcatttgtggtgacggagtaa
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