Geobacillus thermocatenulatus: GT3921_00640
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Entry
GT3921_00640 CDS
T05178
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
gtm
Geobacillus thermocatenulatus
Brite
KEGG Orthology (KO) [BR:
gtm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gtm03016
]
GT3921_00640
Enzymes [BR:
gtm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
GT3921_00640
Transfer RNA biogenesis [BR:
gtm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GT3921_00640
Prokaryotic type
GT3921_00640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ASS97709
UniProt:
A0A226Q6Y7
LinkDB
All DBs
Position
complement(127540..128316)
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AA seq
258 aa
AA seq
DB search
MTTRIKCIIAYDGTHFSGYQIQPGKRTVQGEFEEVLRRMHKGTKVRVTASGRTDAGVHAY
GQVIHFDTPLSLSSEQWKKALNAQLPDDIVVRFVQEADADFHARFSAKAKEYRYKVWTAA
ERDVFRRHYCAWHPYSLHISAMNEALRLLHGTHDFTSFCSAKTSIEDRVRTMYRAEVKVD
GPMLEFRFVGSGFLYNMVRIIVGTVLEIGQRKRSPADISTLLAAKDRRLAGPTAPAEGLY
LWRVYYEDECLVQSLADG
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgacaacacggatcaaatgcatcattgcctatgacggcacccacttttccggctaccaa
atccagccgggaaagcggacggtgcaaggcgagtttgaggaagtgcttcggcggatgcat
aaagggacaaaagtgcgtgtaacggcttccggaaggacggatgccggcgttcatgcctat
ggccaagtgatccactttgatacgccgctttccctttcctcggagcagtggaaaaaggcg
ttgaacgcccagctgccggatgatatcgtcgttcgctttgtacaggaggccgatgcagat
ttccacgcccgtttttcggcgaaagcgaaagaataccgctataaagtatggacggctgcc
gagcgcgacgtgtttcgccgccattattgtgcatggcatccatattcgcttcatatcagc
gcgatgaacgaggcgcttcgtttgcttcatggaacgcacgattttacaagcttttgttcc
gccaaaacgtcgatcgaagaccgggtgcgcaccatgtatcgggctgaagtgaaggtcgac
ggcccgatgctcgagtttcggtttgtcggcagcggctttttgtacaacatggtgcgcatt
atcgttggtacggtgttggagatcggccaaaggaagcgttctcccgccgacatttcgaca
ctgcttgcggcgaaagatcggcgcctcgcgggtccaaccgcgccggccgaagggctgtat
ttatggcgcgtatactatgaggatgaatgtttggtccaatcattggcggatggctga
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