Geobacillus thermocatenulatus: GT3921_03670
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Entry
GT3921_03670 CDS
T05178
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
gtm
Geobacillus thermocatenulatus
Pathway
gtm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gtm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GT3921_03670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gtm03400
]
GT3921_03670
DNA repair and recombination proteins [BR:
gtm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GT3921_03670
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GT3921_03670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
UFL1
AAA_19
AAA_22
AAA_7
AAA_30
TrwB_AAD_bind
UB2H
AAA_16
AAA_25
AAA
Motif
Other DBs
NCBI-ProteinID:
ASS98228
UniProt:
A0A226QBE7
LinkDB
All DBs
Position
740412..742388
Genome browser
AA seq
658 aa
AA seq
DB search
MEGRFQLVSPYEPQGDQPQAIAKLVDGLQRGVKHQTLLGATGTGKTFTISNVIAQVNKPT
LVIAHNKTLAGQLYSELKEFFPHNAVEYFVSYYDYYQPEAYVPQTDTYIEKDAKINDEID
KLRHSATSALFERRDVIIVASVSCIYGLGSPEEYRELVVSLRVGMEIERNALLRRLVDIQ
YDRNDIDFRRGTFRVRGDVVEIFPASRDEHCIRVEFFGDEIERIREVDALTGEVLGEREH
VAIFPASHFVTREEKMRLAIQNIEQELEERLAELRAQGKLLEAQRLEQRTRYDLEMMREM
GFCSGIENYSRHLALRPPGSTPYTLLDYFPDDFLIIVDESHVTLPQLRGMYNGDRARKQV
LVDHGFRLPSALDNRPLTFDEFEQKIHQIIYVSATPGPYELEHSPGVVEQIIRPTGLLDP
TIDVRPTKGQIDDLIGEIHERVERNERTLVTTLTKKMAEDLTDYLKEAGIKVAYLHSEIK
TLERIEIIRDLRLGKYDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNANGHVIMYADAITQSMEIAIQETKRRRAIQEEYNRKHGIVPRTVKKEIRDVIRATY
AAEEKEMYEAKPAAAMTKQEREELIRKLEADMKEAAKALDFERAAQLRDIIFELKAEG
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
gtggagggccgttttcaattagtgtcgccgtacgaaccgcaaggcgatcagccgcaggcg
atcgccaagcttgtggacggcttgcagcggggtgtgaaacatcaaacgcttcttggggcg
acggggacgggcaaaacgtttacgatctcgaacgtgatcgcccaagtcaacaagccgacg
cttgtcatcgcccacaacaaaacgctcgctggccaattgtacagcgagctgaaagagttt
tttccgcacaacgccgtcgaatattttgtcagctactacgattactatcagccggaagcg
tacgtgccgcagacggatacgtacattgaaaaagacgcgaaaatcaacgatgaaatcgac
aaattgcggcactcggcgacatcggcgttgtttgagcgccgggatgtcatcatcgtggcc
agcgtctcatgcatttacggcttagggtcgccggaagaataccgggagctcgtcgtctcg
ctgcgcgtcgggatggaaatcgaacgcaacgcgctgcttcggcggctcgttgacatccaa
tacgaccgcaatgacatcgattttcggcgcggcacgttccgcgtccgcggcgatgttgtc
gaaattttccccgcgtcgcgcgatgaacattgcattcgcgtcgaatttttcggcgatgaa
atcgagcgcatccgcgaggtggacgccttgacgggcgaagtgcttggcgagcgcgagcat
gtcgccattttcccggcgtcgcacttcgtcacgcgcgaggagaaaatgcggcttgcgatt
caaaacattgaacaagagcttgaggagcggctggccgaactgcgcgcccaaggaaagctc
ttggaggcgcagcggctggagcagcggacgcgctatgaccttgaaatgatgcgcgagatg
ggcttttgttccggcatcgaaaactactcgcgccatctggcgcttcggccgccggggtcg
acgccgtatacattgcttgactattttccggacgattttttgatcatcgtggatgagtcg
cacgtcaccttgccgcagctgcgcggcatgtacaacggcgaccgggcgcgcaagcaagtg
ctcgtcgaccacggcttccgcctgccgtcggcgctggacaaccggccgctcacgtttgac
gagttcgagcaaaaaatccatcaaattatttacgtctcggcgacgccagggccgtacgag
cttgagcacagcccgggcgtcgtcgaacaaatcatccgcccgaccgggcttctcgaccca
acgatcgacgtccgtccgacgaaagggcaaatcgacgatttgatcggcgaaattcatgag
cgcgtcgagcggaacgaacgcacgctcgtgacgacgctgacgaaaaaaatggcggaggat
ttgaccgattatttgaaggaagctggcatcaaagtcgcctacttgcattcggaaatcaag
acgcttgagcgcattgaaatcatccgcgatttgcggctcggcaaatacgatgtattggtc
ggcatcaacttgctgcgggaagggctcgacatcccagaggtgtcgctggttgccattttg
gacgccgacaaggaagggtttttgcgctcggagcgctcgctcatccagacgatcggccgg
gcggcgcgcaacgcgaacggtcatgtgatcatgtacgccgatgcgatcacacaatcgatg
gaaatcgccattcaagagacgaagcggcgccgcgcgattcaagaagagtacaaccgaaag
cacggcatcgtgccgcgcacggtgaaaaaggagattcgcgacgtcatccgcgcgacgtat
gcggcggaagagaaggagatgtacgaggcaaagccggcggcagcgatgacgaaacaagag
cgagaagagctgattcgcaagctcgaagcggacatgaaagaggcggccaaagcgctcgac
ttcgagcgggccgcccagctgcgcgacatcattttcgaattgaaagcggaagggtga
DBGET
integrated database retrieval system
