Geobacillus thermocatenulatus: GT3921_05260
Help
Entry
GT3921_05260 CDS
T05178
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
gtm
Geobacillus thermocatenulatus
Brite
KEGG Orthology (KO) [BR:
gtm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gtm03009
]
GT3921_05260
Enzymes [BR:
gtm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
GT3921_05260
Ribosome biogenesis [BR:
gtm03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
GT3921_05260
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
DUF7443
NA-iREase3
Motif
Other DBs
NCBI-ProteinID:
ASS98492
UniProt:
A0A226QC42
LinkDB
All DBs
Position
1049478..1050224
Genome browser
AA seq
248 aa
AA seq
DB search
MELRIDKLLAHMGYGTRKEVKKLLKSGAVKVDGAPVRDAKTKVRPDEQIVTVWGETVEYK
PFIYLMMNKPSGVVSATEDAVEETVVDLLEEEDRAFSPFPVGRLDKDTEGLLLLTNDGQL
AHQLLSPKKHVPKTYFAVVDGEVTEADVAAFRRGVVLDDGYETKPAKLVVLKSGLRSDVE
VTITEGKFHQVKRMFQAVGKRVVYLKRMQMGPLALDPDLAVGEYRELTDEEVDMLKQYRP
EMNEKKGT
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
gtggagctgcgcattgacaagctgctcgcccatatgggatatgggacgaggaaggaagtg
aaaaagctgctcaagtccggggcggtgaaagtggacggcgcgccggtccgtgatgcgaaa
acgaaagtgcggccggatgagcaaatcgtgaccgtgtggggagaaacggtcgagtacaag
ccgttcatttacttgatgatgaataagccttcgggggtcgtttccgcgacggaagatgcc
gtggaagagacggtcgtcgatttgcttgaagaggaagaccgggcattttccccgtttccg
gtcggccggcttgacaaagatacggaaggtctgctgctcttgacgaatgacggccagctc
gcccatcagctgttgtcgccgaaaaaacacgtgccgaaaacgtattttgccgtcgtggac
ggggaagtgacggaagcggatgtcgcagcgtttcggcgcggcgtcgtccttgatgacggc
tatgaaacaaagccggccaagctcgtcgtgctgaaatccggccttcgttccgatgtcgag
gtgacgatcacggaagggaagtttcatcaagtgaagcggatgtttcaagcggtcggcaag
cgggtcgtctatttaaaacgaatgcaaatggggccgctcgcccttgacccggatttggcc
gtcggcgagtatcgggaattgacggacgaagaggtggacatgttgaaacaataccggcca
gagatgaacgaaaaaaaaggaacctga
DBGET
integrated database retrieval system
