KEGG   Geobacillus thermocatenulatus: GT3921_06855
Entry
GT3921_06855      CDS       T05178                                 
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
gtm  Geobacillus thermocatenulatus
Brite
KEGG Orthology (KO) [BR:gtm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gtm02048]
    GT3921_06855
Prokaryotic defense system [BR:gtm02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    GT3921_06855
SSDB
Motif
Pfam: Cas_Csd1
Other DBs
NCBI-ProteinID: ASS98785
LinkDB
Position
1386239..1387996
AA seq 585 aa
MLYELIELAAKLQREKKLPPISYKPKSINWIIDLGGDQPYLKGPFRRGEYRLVEAPFRLR
QGKVTEENVKPYLLADDGRYVLGIPESPEKADEAELMHKGYVRLIEEAYEKTKLKELKKV
LDFLYSPMKNAFREQIGAKDIVTFQDDEESLIFEKSEIQTFWAEYLASDLLSDDECDCSV
CGKRSAYVRYLPNPVQLFGQSCQLTSFNNPSFESMGKTQTNNVPVCFGCATLVVDTLNYL
IREDQHHTPLYISDRNILQSQMAIYWVDDQIEGRGCIQLDEKLFASPIEQWLFDEDTNQR
TPPPELKQLEELLALPKTGREQALHLDKTFFHMAVLSANKARLVVREWIHTSISQLLMHL
ERYAAAVRIVQPTGEKGYLLPLAALIRAVDMSPGLVRQCLRTIYQGALPPTELLPLALQR
FRSLKVLSDPKETWRYHSSASLLKLVLTYGKEEANTMQSLNNHCLQPAYICGRLLAVLEE
IQRRALGYRIGSTIVDRFYGAASTAPASTFGSLLRLSTTAHLPKVSGELGRLLEEVMKQL
DEAGGFPTIFNLREQAEFALGFYHQRAEFRSRHQSNQTNGTGESQ
NT seq 1758 nt   +upstreamnt  +downstreamnt
atgctttacgagttgattgagttggcggctaagttgcagagggaaaaaaaactaccaccg
atctcctataaacctaaatcaatcaattggattattgatttaggtggggatcaaccatat
ttgaaagggccgtttagaaggggagaataccgtttggtggaagcgccgtttcggttgagg
caagggaaagttacggaagaaaacgtaaagccttatttgttggctgatgatggccgctat
gtacttggcatccctgaaagtccagaaaaggcggatgaagcggagttaatgcataaaggg
tatgttcgattaattgaggaagcttatgagaaaacaaagttgaaagaattaaaaaaagtg
ctggattttttgtacagtccgatgaagaatgcgttccgtgagcaaattggtgccaaggat
atcgtgacgtttcaagatgatgaggagtcattgatttttgaaaagagtgaaattcaaaca
ttttgggctgaatacttggcgagtgatttgctgtccgacgatgaatgtgactgttctgtt
tgcgggaagcgatcggcttatgtacggtatttgcccaaccctgtccagttatttggacaa
tcgtgccaactgacgtcgtttaataacccgtcgtttgaatcaatgggcaaaactcaaacg
aataatgtacctgtctgcttcgggtgtgctactttggttgtcgatacattgaattatctc
attagggaagatcaacatcatactcccctgtatataagcgaccgaaatattttgcaatcc
caaatggccatatattgggttgatgaccaaattgaggggaggggatgtatccaacttgat
gaaaaattgtttgcatcgccaatcgaacaatggctttttgatgaagatacaaatcaacgg
actcctccccctgagttgaagcagctcgaggaactgctggctcttccgaaaacagggcgc
gagcaggcattgcacttagacaagacgttttttcatatggctgtcctttcggccaataaa
gcgagattagtcgttcgtgaatggattcatacgtcgatttctcaattgctgatgcatttg
gagaggtatgcggccgctgtgcgcatcgttcagccgactggggaaaaaggctatttattg
ccgctggcagctttgattcgcgctgttgatatgtcgccggggctggtgcgccaatgtttg
cgcacgatttatcaaggggctttgccgcctactgaattgctgccgttagcgcttcaacgt
ttccgctctttgaaagtattgagtgatccgaaggaaacgtggagatatcattcatcagcc
agcttgttaaaactcgttctcacatatggaaaggaggaagcaaatacaatgcaatcgtta
aacaaccattgcttgcagccggcttatatttgtggacgattattggccgtattggaagaa
attcaacggcgcgctttgggataccgaattggaagcacaatcgtggatcgattttatggc
gcggcttctacagctccagcatcgacatttggttcattgctgaggctttcaacaacagct
catctgccaaaagtgtctggtgagcttggccgtttgcttgaggaagtgatgaaacagctg
gatgaagctggaggtttcccgacgattttcaatttaagagaacaggcagagttcgcactt
ggtttttatcatcaacgcgctgagttccgcagtcgccatcaaagcaatcaaacaaatgga
acgggggaaagccaatga

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