Geobacillus thermocatenulatus: GT3921_13190
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Entry
GT3921_13190 CDS
T05178
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gtm
Geobacillus thermocatenulatus
Brite
KEGG Orthology (KO) [BR:
gtm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gtm03016
]
GT3921_13190
Enzymes [BR:
gtm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GT3921_13190
Transfer RNA biogenesis [BR:
gtm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GT3921_13190
Prokaryotic type
GT3921_13190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ASS99900
UniProt:
A0A226Q3W2
LinkDB
All DBs
Position
complement(2700809..2701717)
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AA seq
302 aa
AA seq
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MDGVLLLNKPKGMTSHDCVAKVRRLLGVKKAGHTGTLDPNVSGVLPICLGKATRIAEFLT
GTRKTYEGKVTLGAATTTEDADGDIIAARPVDRPIARAEIEAVFDSLTGEMEQTPPMYSA
VKVGGKKLYEYARAGIEVERPTRRVTIYELELLDEREQFFGETVSFRFRVTCSKGTYVRT
LSVMIGERLGYPAHMSDLIRTASGPFRLEDCVTFEDVERRAADGTADALLIPIERALFHL
PKYEINDKVAEKVKNGALLRLPAFLEKLDGPVVLVSPEREALALYVKHPARPGLMKPLKV
FR
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggacggggtattgctgctgaataaaccgaaagggatgacgtctcacgactgcgtggcc
aaagtgcgccgtctgcttggcgtaaaaaaagcgggacacaccggcacgcttgacccaaac
gtgtccggtgtgctgcccatttgccttggcaaggcgacgcgcatcgccgagtttttgacc
gggacgaggaaaacgtatgaaggaaaagtgacgcttggcgccgcgacgacaaccgaagat
gcggacggcgacatcatcgccgcccgtccggttgaccggccgattgcgcgcgcggaaatc
gaagcggtgtttgacagcttgaccggagaaatggagcaaacgccgccgatgtactccgcg
gtgaaagtgggcggcaagaaactgtatgaatatgcgcgcgccggcatcgaagtcgaacgt
ccgacgcggcgcgtgaccatttatgagctcgaactgcttgatgaacgtgaacaattcttt
ggggaaacggtgtcatttcgctttcgcgtcacgtgcagcaaaggcacgtacgtgcgtacg
ctttcggtgatgatcggcgagcggctcggctatccggcgcatatgtccgacctcatccgt
acggcgtccgggccgtttcggcttgaagattgcgtaacgtttgaagacgttgagcgccgg
gcggccgacgggacggctgatgccttgctcatcccgattgagcgggcgctttttcatttg
ccgaaatatgaaatcaatgataaagtagcagagaaggtaaaaaacggggcgctgctccgg
cttcccgcttttttagagaaacttgacggaccggtcgtgcttgtttcgcccgagcgggaa
gcgctggccctgtacgtgaagcatccggcgcgccccggcttgatgaaaccgctcaaagtg
tttcgttaa
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