Geobacillus thermocatenulatus: GT3921_13465
Help
Entry
GT3921_13465 CDS
T05178
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gtm
Geobacillus thermocatenulatus
Brite
KEGG Orthology (KO) [BR:
gtm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gtm03032
]
GT3921_13465
03400 DNA repair and recombination proteins [BR:
gtm03400
]
GT3921_13465
Enzymes [BR:
gtm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GT3921_13465
DNA replication proteins [BR:
gtm03032
]
Prokaryotic type
DNA Topoisomerases
GT3921_13465
DNA repair and recombination proteins [BR:
gtm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GT3921_13465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ASS99952
UniProt:
A0A226Q361
LinkDB
All DBs
Position
complement(2751256..2753331)
Genome browser
AA seq
691 aa
AA seq
DB search
MSDYLVIVESPTKAKTIERYLGKKYTVKASMGHVRDLPKSQMGVDIDHGYEPKYITIRGK
GQVIKELKTAAKKAKKVFLAADPDREGEAIAWHLAHMLDLDIHSDCRVVFHEITKDAIQQ
SFQKPRAINMNLVDAQQARRVLDRLVGYNISPLLWKKVKKGLSAGRVQSVALRLIIDRER
EIREFQPEEYWTIQATFQKEGETFAASFYSIDGQKRDLKTEADVKAVLDRLNGTAFAVKT
VTKRERKRSPVPPFTTSSLQQEAARKLNFRTKKTMMIAQQLYEGIDLGSEGTVGLITYMR
TDSTRVAETAQQEAAAYIEATFGAMYVNQEKRKEKKSTNAQDAHEAIRPTSAFRDPDKVK
PYLTRDQFRLYKLIWERFIASQMAAAVLDTMSVELENNGVVFRASGSKVKFPGFMKVYIE
GTDDQTEEQDRILPDLEEEETVESETIESKQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQKRNYVVLENKRFVPTELGEVVVELMLEFFPEIIDVEFTAKMEKELDEIEEGK
VEWIKVVDEFYREFEKRLKVAEKEMRAVEIKDEPAGMDCEVCGSPMVYKMGRFGKFIACS
NFPECRHTKPIVKEIGVKCPKCREGNIVERSTKRKRVFYGCDRFPDCDFVSWDKPLARPC
PKCAGLLVEKELKKGVQVQCTACDYEERLEA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactacttagttatcgtcgaatcgccaacgaaagcgaagacgatcgaacgatac
ttgggaaaaaaatatacagtcaaagcgtcgatgggccacgtccgcgatttgccaaaaagc
caaatgggcgttgatatagaccacggctacgagccgaaatacattacgatccgcggcaaa
ggccaggtgatcaaagagttgaaaacggcggcgaagaaggcgaaaaaagtgtttcttgcc
gccgaccccgatcgggaaggagaggcgatcgcttggcatctggcccacatgctcgatcta
gacattcactctgattgccgtgttgtctttcatgagatcacgaaggatgcgattcagcaa
tcgtttcaaaagccgcgcgcgatcaatatgaatcttgttgacgcccagcaggcgcggcgc
gtgctcgaccgcctcgtcggctataacatcagcccgctcttatggaaaaaggtgaaaaaa
ggattaagcgccggccgcgtccaatcggtggcgctgcgcctcatcatcgatcgggaacga
gaaattcgcgaatttcagccggaagaatattggacgattcaagcgacgtttcaaaaagaa
ggagagacgtttgccgcctcgttttacagtattgacggacaaaagcgcgatttaaagacg
gaggcggatgtgaaagctgtgctggatcgcttaaacggaacggcatttgcggtgaaaacg
gtgacaaagcgagagcgcaagcgcagccccgtgccgccgtttacgacgtcgtcgcttcag
caggaagcggcgcgcaaactgaatttccggacgaaaaagacgatgatgatcgcccagcag
ctgtacgaaggaatcgatcttggcagcgaagggacggtcggtttgatcacgtatatgcgc
accgattcaacgcgcgtcgccgagacggcgcagcaagaggcagcggcgtatatcgaggcg
acgttcggcgcgatgtatgtcaaccaggaaaagcggaaagagaagaaaagcacgaacgcc
caagacgcccatgaagcgatccgcccgacatcggcatttcgcgatccggacaaagtgaaa
ccgtatttgacgcgcgaccagtttcggttgtataaactcatttgggaacggttcatcgcc
agtcaaatggcagcagccgtgcttgacaccatgagcgtcgagttggaaaacaacggtgtc
gtgttccgcgccagcggctcgaaggtgaaatttccagggtttatgaaagtgtatattgaa
ggaacggacgatcaaacggaagagcaggaccgtatcctcccggatttggaagaagaggaa
acggttgagagcgaaacgatcgaatcgaagcagcactttacgcagccgccgccgcgttac
acggaagcccgcctcgttaaaacgttggaggaactcggcatcggccgtccgtcgacgtac
gccccgacgcttgatacgatccaaaaacgcaactatgttgtccttgagaacaagcggttt
gtcccgaccgagctcggcgaagtcgttgtggagctgatgctcgaatttttcccggaaatt
atcgatgtcgagtttacggcgaaaatggaaaaagaattagacgaaattgaagaaggaaaa
gtggaatggatcaaagtcgtcgacgaattttaccgggaatttgaaaaacggttgaaagtg
gcggaaaaagaaatgcgcgcagttgagattaaggatgagccagccggcatggactgcgag
gtgtgcggcagcccgatggtgtacaaaatgggccgtttcggcaagtttatcgcctgctca
aattttccggaatgccgccatacgaagccgattgtcaaagaaatcggcgtcaagtgccca
aaatgccgcgagggcaacatcgtcgagcgcagcacgaaacgaaagcgggtgttttacggt
tgcgaccgtttcccggattgcgacttcgtctcgtgggataaaccgctcgcccgcccgtgc
ccgaaatgcgcggggctgcttgtggagaaagagctgaaaaaaggtgtgcaagtgcaatgc
acggcgtgcgattatgaagagcggctagaagcttaa
DBGET
integrated database retrieval system
