Geobacillus thermocatenulatus: GT3921_13900
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Entry
GT3921_13900 CDS
T05178
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
gtm
Geobacillus thermocatenulatus
Pathway
gtm00470
D-Amino acid metabolism
gtm00550
Peptidoglycan biosynthesis
gtm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gtm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GT3921_13900 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GT3921_13900 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gtm01011
]
GT3921_13900 (murD)
Enzymes [BR:
gtm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
GT3921_13900 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
gtm01011
]
Precursor biosynthesis
Amino acid ligase
GT3921_13900 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
AlaDh_PNT_C
Mur_ligase
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AST00034
UniProt:
A0A226Q260
LinkDB
All DBs
Position
complement(2840247..2841602)
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AA seq
451 aa
AA seq
DB search
MKPTRFYQHRHVLVIGLAKSGAAAARLLAELGAKVVVNDQKPLSENMEAKQLEPLGIRVV
CGGHPLELLDEPFDLVVKNPGIPYTNPMVKKALEKGLPVVTEVELAYHISEGPFIGITGS
NGKTTTTTLIYEMLKADGQDPLLAGNIGLVACEVAREAKPGQWLVTELSSFQLAGIDKFR
PAIGVLLNIFDAHLDYHGTKEAYAAAKANIFRNQTERDYAVVNADDPLVMNIASSVRSQK
VLFSATKLLGEGAYVQDGAIYWNGDPVIRIADIVLPGQHNLENILAAVAAAKLAGAGNEA
IVQVLTTFAGVKHRLQYVAEVDGRRFYNDSKATNILATQKALSAFAGEPVILLAGGLDRG
NEFDDLLPYLQQVKAVVLFGQTADKIGRIAQKAGIETIRYVDNVEKAVPVAFELSEPGDV
ILLSPACASWDQYKTFEERGDIFINAVHKLK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaccgactcgtttttatcaacatcgtcatgtacttgtcattggattggcgaaaagc
ggagcggcggcagctcggcttcttgcggagttaggcgctaaggtcgtcgtcaatgatcaa
aagccgctttcggaaaacatggaggccaagcagcttgaaccgctcggtattcgcgtcgtt
tgcggcggtcatccgcttgaactgcttgatgagccgtttgaccttgtcgtgaaaaacccg
ggcattccgtacacgaacccaatggtgaaaaaggcgcttgagaaggggcttccggttgtg
accgaagtggagcttgcttatcacatttccgaagggccgtttatcggcatcaccgggtcc
aacggaaaaacgacgacgaccacgctcatttacgaaatgttaaaagcggatggccaagat
ccgctgcttgccggcaacatcggccttgtcgcctgcgaggtggcgagggaagcgaagccg
gggcaatggcttgtcacggaactgtcttcgttccagcttgccggcattgacaagtttcgc
ccagccattggggttttgctcaatattttcgacgcccacttggactaccacggaacgaaa
gaggcgtatgcagcggcaaaggcgaacattttccgcaatcaaacggagcgcgattatgcc
gtcgtcaatgccgacgatccgctcgtgatgaacattgcctcttcagttcgatcgcaaaaa
gtgctgttttcggcgacgaagcttcttggcgaaggggcgtacgttcaagatggcgccatc
tattggaacggtgatcccgttatcagaatcgctgacattgttcttcctggacagcacaat
ttggaaaacattttagcggcggtggcggccgccaagctggccggcgccggcaacgaggcg
atcgttcaagtgttgacgacgtttgctggcgtaaaacatcggcttcaatatgtggccgaa
gtcgacggccggcggttttacaacgattcgaaagcgacgaacatcttagcgacgcaaaag
gcgctttcagcgttcgccggcgagccggtcattttgttggccggcgggcttgaccgcggc
aatgagtttgatgatcttctcccgtatttgcaacaggtaaaggcggtcgtactgttcggc
cagacggcggataaaatcggccgcatcgcccaaaaagcgggaatagaaacgatccgatat
gtcgataatgtggaaaaagccgtcccggttgctttcgagctttccgagccgggcgacgtc
attttgctctctccggcatgcgccagctgggatcaatacaaaactttcgaggagagaggg
gacatttttatcaacgccgtgcataagttgaaatag
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