KEGG   Geobacillus thermocatenulatus: GT3921_14220
Entry
GT3921_14220      CDS       T05178                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
gtm  Geobacillus thermocatenulatus
Pathway
gtm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gtm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GT3921_14220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gtm03019]
    GT3921_14220
Messenger RNA biogenesis [BR:gtm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     GT3921_14220
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 DUF4453
Other DBs
NCBI-ProteinID: AST00091
UniProt: A0A226Q2A9
LinkDB
Position
2900322..2901989
AA seq 555 aa
MKLLADQQVGVFALGGLGEIGKNTYGVQFQDEIIVIDAGIKFPEDELLGIDYVIPDYSYL
VKHADKVKGLFITHGHEDHIGGIPYLLRQVNIPIYGGKLALGLIRNKLEEHGLLRQAKLI
EIREDDVIRFQKTAVTFFRTTHSIPDSYGIVVKTPVGQIVHTGDFKFDFTPVGEPANLTK
MAEIGKEGVLCLMSDSTNSEIPHFTMSERRVGESIHDIFRKVEGRIIFATFASNIHRLQQ
VTEAAVANNRKIAVFGRSMEAAIEIGQDLGYIKCPKGTFVDANEINRLPANRVTILCTGS
QGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTVSVNRTINMLYRAGAEVIHGPL
NDIHTSGHGGQEEQKLMIRLMKPKYFMPIHGEYRMQKMHAKLAIDCGVPEENCFIMDNGE
VLGISDKEARIVGKIPSGSVYIDGSGVGDIGNIVLRDRRILSEEGLVIVVVSINMKEFKI
AAGPDIISRGFVYMRESGDLISEAQVLISKHLEKVLERKTNQWSEIKNEITETLAPFLYE
RTKRRPMILPIIMEI
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgaagctgttagctgaccagcaagttggcgtttttgccctcggcggactgggtgaaatc
ggaaaaaatacatacggcgtacaattccaagacgaaatcattgtcattgatgcaggcatt
aagtttccggaagatgagctgcttgggatcgactatgtcattccagactactcctattta
gtgaagcacgcggacaaagtgaaagggctgttcatcacccacgggcacgaagaccatatc
ggcggcattccgtatttgctccggcaggtgaacatcccgatttacggcggcaaattggcg
cttggactgattcggaataaacttgaagaacatggcttgttgcgccaagcgaaactcatt
gagattcgcgaagacgatgtcatccgctttcaaaaaacggccgtcacctttttccggacg
acgcacagcatcccagacagctacggtattgttgtgaaaacgccagtcgggcaaatcgtt
cacactggggattttaaattcgactttacgccggtcggtgagccagccaatttgacaaaa
atggccgagattgggaaagaaggcgttctttgcctcatgtcggacagcacgaacagcgag
attccacattttacgatgtcggagcgacgcgtcggcgaaagcattcatgacattttccgc
aaggtggaaggacgcatcattttcgccacatttgcatccaacatccaccgtcttcaacag
gtgacggaagcagccgtcgccaataaccgaaaaatcgctgtcttcggccgaagcatggaa
gcggcgattgagatcggacaagacctcggctatatcaaatgcccgaaaggcacgttcgtc
gacgcgaacgaaatcaaccgcctgccggccaaccgggtgacgattttatgcaccggcagc
caaggggagccgatggccgccttgtcacgcatcgccaacggcacgcaccggcaaattcaa
atcattccgggcgacacggtcgtcttttcctcatccccgatcccgggcaacacggtgagc
gtcaaccgtacgatcaacatgctgtaccgcgctggtgcagaagtcatccacggtccgctc
aacgacatccatacgtctggccacggcggacaagaagagcaaaaattgatgatccggctg
atgaagccgaaatatttcatgcccatccacggcgaataccgcatgcaaaaaatgcacgcc
aagctcgccattgactgcggcgtgccggaggaaaactgctttattatggacaacggcgaa
gtgcttggcatcagcgacaaagaagcgcgcatcgtcggcaagatcccgtccggctccgtc
tacatcgacggcagcggtgtcggcgacatcggcaacatcgtcttgcgcgaccgccgcatt
ttgtctgaggaaggactcgtgattgtcgtcgtcagcatcaacatgaaagaatttaaaatc
gccgccggtcctgatattatctctcgcggcttcgtctatatgcgggagtcaggcgacttg
atcagcgaagcgcaggtgttgatctccaagcatctcgaaaaagtgctggaacggaaaaca
aaccaatggtcggagatcaaaaacgaaattacggaaacgctcgctccgttcttgtacgag
cggacgaaacggcggccgatgattttgccgatcatcatggaaatctaa

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