Geobacillus thermocatenulatus: GT3921_16155
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Entry
GT3921_16155 CDS
T05178
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
gtm
Geobacillus thermocatenulatus
Brite
KEGG Orthology (KO) [BR:
gtm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gtm03400
]
GT3921_16155
DNA repair and recombination proteins [BR:
gtm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GT3921_16155
Archaeal homologous recombinant proteins
GT3921_16155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
SMC_N
AAA_29
AAA_21
ABC_tran
MMR_HSR1
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AST00425
UniProt:
A0A226Q395
LinkDB
All DBs
Position
complement(3294802..3298146)
Genome browser
AA seq
1114 aa
AA seq
DB search
MKPISLTIAGLHSFREKQTIDFTALCEGGVFGIFGPTGSGKSTILDAMTLALFGSVERAA
NRTQAIINHAEQELFVSFTFELENAAGAKRYTVERSLKKVDEWRTRSAVCRLIEHRSEPV
VLADKLSEVDKAIEQLLGLTMEDFTRAVVLPQGKFAEFLSLKGSERRQMLQRLFHLERYG
DQLNKKLKDRLAAARQEWEKIEAEKAGLGDASKAALKQAEADVRELAGLFTKRKKELEEV
EADVERTKQRWAWQQEKEAVEQELAALHRHEPAIRELEVKKERAEQAERIWPYWEQCEQA
CRLRAEAFRRYERLARRLEEAQLSYEEAARRYERARQEKAQREPELLVQMERLRQAAQLE
QQMEVLGQELTALREERKRLIAQEKAAVRRFEEASVWYERGAKRQRELKEELKQHEEALD
RKDEAERAYRQKQHIEQAASAIARVDAQLQQKEAVWRRAKEEKLERERRSAAVGSRLQEL
FRRMERTYRFVCWRQQDAEKQLYTLQKTMEAERQRAEEARTAQLASALAERLRPGEPCPV
CGSREHPHPAAAPNDVQLERLSELEAERKRYEQDWQMIISFKVQLEQLAELAAGHEAPPL
FAESRSVEEAVDLTVEVRALGQEVIELKEAVYRVLAQWNEAESARREAEKACQWIAADIE
ALQVEKQRLEEERRLLEQQWRQMYPFLSLETIDAVYEQLCERENVRRDVQKRLEDSVLFL
EEKQRAKEEAAKERSRLETERVRLDSLISAKQQQWNEYERQRGEKAGEGPAAVHLQKAEA
EWRQLQNGEQQAYEAWQRAQREYQMLESETKAAKQAWEEGVRREEEALARWRGALLDTMF
ADAEQVKQAKAEKAQRDEWDETIRRYWRQIEQAEHRLAQLAAAIGGATVSAEQWEAMQRV
YAELKGQVEAMTQQLGAAQAKVEELRKKHSRFVELEEKQAELSRRIERYKQLQALLRGNS
FVEFMAEEQLEQVTAMASERLQRLTRHRYSLELDSQGGFLIRDDANGGVRRPVSTLSGGE
TFLTSLSLALALSAQIQLRGEYPLRFFFLDEGFGTLDAELLETVISALEKLHTERLAVGV
ISHVQEIRHRLPRRLIVEPAEPSGRGTRVWLEMI
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgatctcgctgacgatcgccgggcttcatagctttcgtgaaaagcagacgatc
gatttcaccgcactgtgtgagggcggtgtgttcggcattttcgggccgacgggaagcggc
aaatcaacgattttagacgccatgacgctcgccttgttcggcagcgtcgagcgggcggcc
aaccgcacgcaggcgatcatcaaccacgccgagcaagagttgtttgtctcgtttacgttt
gagctggaaaatgcggcaggagcgaaacggtatacagtcgaacgaagcttaaaaaaagtg
gacgaatggcggacgcgcagcgccgtttgccgcctgatcgagcatcggtccgagccggtc
gtgctcgccgataaactatcggaggtggacaaggcgatcgagcaattgctcggcttgacg
atggaggatttcacccgggcggtcgtcttgccgcaaggaaaatttgccgaatttttatcg
ctcaaagggtcggagcgtcggcaaatgctgcagcgcctcttccatcttgagcggtatggc
gatcagttgaataaaaagttgaaagaccggcttgccgccgctcggcaagaatgggaaaaa
atcgaagcggaaaaagcggggcttggcgatgcttcaaaagcagcgctcaagcaggcagag
gcggatgtgcgggagctcgcggggctgtttaccaagcgaaaaaaagagcttgaggaagtc
gaagcagatgtggaacgaacaaaacaacgatgggcgtggcagcaagaaaaagaagcggtc
gaacaagagcttgccgcactgcaccggcatgagcccgctatccgcgagctggaagtgaaa
aaagagcgcgctgagcaagcagagcgcatctggccgtattgggagcagtgcgagcaggca
tgtcgcttgcgggcagaggcgtttcgtcggtatgaaagactggcgcgtcgattagaggaa
gcccaattgagctatgaagaagcggcgcggcgttatgaacgggcgcgccaagaaaaggcg
cagcgcgaaccggaattgctcgtccagatggaacggctgcggcaggcggcgcagcttgag
cagcaaatggaagtgcttggacaggagctcacagctcttcgtgaagagaggaagcgactc
attgcccaggagaaggcagctgtacgccggtttgaagaggcgtcggtctggtatgagcgc
ggcgcgaagcggcagcgggagttgaaagaagaactgaaacagcatgaagaggcgctcgat
agaaaagatgaggcagagcgggcgtacaggcagaagcagcatattgagcaagcggcgtca
gccatcgctcgcgtcgatgcccaacttcagcaaaaggaggccgtttggcgtcgggcgaaa
gaggaaaagttggagcgggaacgccgatcagccgctgtcggctcccggcttcaagagctg
ttccggcgtatggagcggacgtatcgtttcgtctgctggcggcagcaggacgctgaaaaa
caattgtatacgttgcagaaaaccatggaggcggagcgacaacgagccgaagaagcgcgg
acggcgcaactcgcctccgccttggctgagcggctccgtcccggcgagccgtgtccagtg
tgcggatcgcgcgagcatccgcatccggccgccgcaccgaacgatgtccaacttgagcgt
ctgtccgagcttgaggcagagcggaagcggtatgaacaagattggcaaatgatcatttcg
ttcaaggtgcagctcgagcagctcgccgagctggcggcaggccatgaagcgccgcctctg
tttgccgaaagccgctcggtggaggaggccgtcgacctcactgtggaagtgcgggcgctt
gggcaagaggtcattgaattgaaagaagcggtctaccgggtgcttgcccaatggaatgaa
gccgagtcagcgcggcgcgaagcggagaaagcgtgccaatggatagcggcggacatcgaa
gcgctgcaagttgaaaagcagcggctggaggaagagcggcggctgcttgaacagcaatgg
cggcagatgtatcctttcctttcgcttgagacgatcgatgcggtgtatgaacagctgtgt
gaacgggaaaacgtgcggcgcgacgtgcaaaaacggctggaggacagcgtgctgttttta
gaggaaaaacagcgggcgaaagaggaagcggccaaagagcggagccggcttgagacggag
cgggtgcgtcttgactcactgattagtgccaaacagcagcaatggaacgaatatgagcgg
caacggggcgagaaggcgggggaaggcccagcggctgtgcatcttcagaaggcggaggcc
gaatggcgccagctgcaaaacggcgagcaacaggcgtatgaggcctggcagcgagcccag
cgggaatatcaaatgcttgaaagcgaaacaaaagcagccaagcaggcgtgggaagaaggc
gtccgccgcgaagaagaggcgctcgctcgctggcgcggcgcgcttttggacaccatgttt
gccgatgccgaacaagtcaagcaagcgaaggcggaaaaagcgcagcgagatgaatgggat
gagacaatccgccgctattggcgccaaatcgagcaagccgaacatcgcctcgctcagcta
gccgccgccatcgggggggcgacggtgagcgctgaacaatgggaggcgatgcagcgtgta
tacgccgagttgaaggggcaagtggaggcgatgacgcagcagcttggggcggctcaagcg
aaggtggaagagttgagaaaaaaacatagccgctttgttgaactggaggagaagcaggcg
gagctcagccggcgcatcgagcggtataaacagctgcaggcgttgcttcgcggcaacagt
tttgtcgaatttatggcggaggagcagcttgagcaagtcaccgccatggcttcggaacgg
ctgcagcggctgacacggcaccggtattcgctcgaattggattcgcaaggcgggtttctg
atccgtgatgatgccaatggcggcgtcagacggccggtatcgacgctctcgggtggggag
acatttttgacgtcactgtcgttggcgttggcgttgtcggcgcaaattcagctgcgcggt
gagtatccgctccgctttttcttcttggacgaagggtttggcaccctcgatgctgagctg
cttgagacggtcatttctgccttggaaaagctgcataccgagcggctggcggtcggtgtc
atcagtcatgtacaagaaattcgccaccgtctgccgcgacggctcatcgtcgaaccggct
gaaccgtccggccgcggcacgcgcgtctggctggaaatgatttga
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