Geobacillus thermocatenulatus: GT3921_16170
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Entry
GT3921_16170 CDS
T05178
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
gtm
Geobacillus thermocatenulatus
Brite
KEGG Orthology (KO) [BR:
gtm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gtm03400
]
GT3921_16170
Enzymes [BR:
gtm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GT3921_16170
DNA repair and recombination proteins [BR:
gtm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GT3921_16170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
AAA_22
DEAD
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AST00428
UniProt:
A0A226Q381
LinkDB
All DBs
Position
complement(3303071..3306589)
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AA seq
1172 aa
AA seq
DB search
MVVDTMSLRFLLGRSGSGKTAVCLEEIRRQLQEDPKGRAIVYLVPEQMTFQCEYALIHTE
GVGGMIRAQVFSFTRLAWRVLQETGGMTRYHIHDVGVQMMIRKIIEQRKQELKLFGRAAD
KHGFIEQLNEMITECKRYCLTPGELRRHAEAFEDGPDQPGRRLLADKLRDVALVYEELER
SLIGHYLDSEDYLRLLAEHIPRSSYLRDADIYIDGFHHFAPQEYMIIEQLLRHCRRVTVC
LTIDRPYDDGMPDELHLFYLPAQTYRQLRELALSNDIAIEEPIVLSANRRHEDRALVHLE
AQFHRRPLSPYETTTDAIHLYEAANRRAEIEAVAREIVRLARDEGARYCDIALIIRQTEA
YRDLVKTVFFDFGIPYFMDEKEPMHHHPLIELVRAALETVVTRWRYEAVFRAVKTDLLFP
TDGDLHMWREAADKLENYVLAYGIKGDKWTNNERWAYRRYQALDGLNVPQTDEERQFEDM
LNEWREALAAPLRRLERRLRRAEDGRGFCMALYLFLEELQIPKKLEKMSAQAEADGRLVE
ARQHEQAWNAVVDLLDQYVEMLGTESLPLAEFVKIIEAGLDRLEFSLVPPAMDQVIVAQL
DRSRLIDIKYAFVIGANDGVIPAKVKEDGLMAEVEREQLRELGVALAPGGREQLFYDPFF
VYLALVCPSRRLYVTYPLADREGKALMPSPLIKQLTELFPHAPVHLCGNDPFDAPAEKAE
AFVTAPRATQTYLISQLRAWKRNYGIDPLWWDVYNTFIGHRDWKEPVRHAVSALFYTNGA
TPLKKQWSQRLYGKKIQASVSRMEQFQKCPYAHFASHGLRLKERNVFRLEAPDVGQLFHA
AIKQIADRLREQHLDWRELSRSDCERLSAEAVERIAPLIQQQVLSSSHRYEYMKRKLKHV
VARTTHVLSEHARASGFVPIGLELSFGPNGDLPPLRFRLRDGTVMELVGRIDRVDKAESS
QGVLLRIIDYKSSAKTLDLTEVYYGLALQMFTYLDIVLTYAEQLVGQPALPAGVLYFHIH
NPIVQAKQWVDDEVEMAKKLLEPFRMRGLLLADVEAIRLMDNRTEDGQWSLIVPAQLTKS
GSIHSRSSVASPSDFAALRQHVRRLFIDIGGQIADGVVSIAPYKLKDKTACEFCVFKPVC
QFDEALSGNEYRKLAPQTKEAVIEKLAEGKEG
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggatacaatgtcgctgcggtttttgctcggacggtcaggaagtgggaaaacg
gccgtctgcctcgaagaaattcgccgccagttgcaagaggatccaaaaggaagggcgatc
gtctatctcgttccggagcaaatgacatttcaatgcgaatacgcgttgatccataccgag
ggagtgggcgggatgattcgcgcccaagtgttcagcttcacccgtctcgcttggcgcgtg
ctgcaggaaacaggcggcatgacccggtaccacattcatgatgttggcgtgcagatgatg
atccgcaaaattattgagcaacgcaaacaagagctgaaactgtttggccgcgcggcggac
aaacatgggtttatcgagcagctgaacgaaatgatcaccgaatgcaaacggtattgcctg
acgccgggcgaactccgccgacatgctgaggcgttcgaggatgggcccgatcaaccgggc
cgccgcttgctcgctgacaagttgagagatgtcgcgcttgtgtatgaggaacttgagcgg
agtcttatcggccactatcttgattcggaagattatttgcgcttgctcgctgagcatatt
ccgcgctcaagttatttgcgggatgccgatatttacatcgacggctttcatcatttcgcg
ccgcaagaatatatgatcatcgaacagcttcttcgccattgccggcgcgtcaccgtttgt
ttgacgatcgaccgcccgtatgacgacggaatgccggacgaacttcatctcttttatttg
ccggcgcaaacgtaccgccagctgagggagttggcgctaagcaatgacattgcgatcgaa
gagccgatcgtgctttcggccaaccgacgccatgaagacagggcgctcgttcatcttgag
gcgcaatttcaccgacgccccctgtcgccatacgagacgacgaccgatgccatccatctt
tatgaagcggccaaccgccgcgcagagattgaagcagtcgcccgggagatcgttcgcctt
gcccgcgatgaaggggcgcgctattgcgacattgcgctgatcatccgccagacggaggcg
tatcgcgatctggtgaaaacggtgttttttgattttgggatcccgtattttatggatgaa
aaagaaccgatgcaccaccacccgctcattgaactcgtgcgcgctgccttagagacggtc
gtgacgcgttggcgatatgaagcggtgtttcgggcggtgaaaacggatttgctttttcca
acggacggcgatctgcacatgtggcgcgaggcggccgacaagctcgaaaactatgtgctt
gcttacggaatcaaaggggataagtggacaaacaatgagcgctgggcgtatcggcgctat
caggcgcttgacggtttgaacgtaccacaaacggacgaagagcggcagtttgaggacatg
ctcaatgaatggcgcgaggcgttggccgctccgcttcgccggttggagcgccgtctgcgc
cgggcggaggacggacgcgggttttgtatggcattatatctgtttttggaagaattgcag
attccaaaaaaactagagaaaatgagcgcacaagcggaagcggacggccgcctcgttgaa
gcgcgccagcatgaacaggcgtggaacgccgtcgtcgatttgcttgaccaatatgtagaa
atgctcgggacagaatcgctgccgctcgctgagtttgtcaagattatcgaggccgggctc
gatcgattggaattctcccttgtgccgccggcgatggaccaggtgatcgtcgctcagctt
gatcgctctcgtttaattgacatcaagtatgcgttcgtcatcggcgccaacgatggcgtg
attccagcgaaagtgaaggaagacgggctgatggcggaagtggagcgcgagcagctgcgt
gagttgggggtggcgctcgccccaggggggcgggagcagctgttttatgacccgtttttt
gtctacttggcacttgtttgtccgagccggcggctgtatgttacatatccgcttgctgat
agggaagggaaagcattgatgccgtcgccgctcatcaagcagcttacggaactgtttccg
catgcgccggtgcatctgtgcggcaacgacccgttcgacgccccggcagaaaaagcagag
gcgttcgtgaccgcgccgcgggcgacgcaaacgtatttgatcagccagcttcgagcatgg
aagcgcaactacggcatcgatccgctttggtgggatgtatataacacgttcatcggccat
cgggactggaaggagccggtgcggcatgccgtctccgcgctcttttatacaaacggagcg
acgccgctcaaaaaacagtggagccagcggctgtacggcaaaaaaattcaggcgagcgtc
tcgcgcatggagcagtttcaaaaatgcccgtacgcccatttcgcatcgcacgggctgcgg
ttgaaagagcgcaacgttttccgacttgaggcgccggatgttgggcaattgttccatgcc
gccatcaagcaaatcgctgaccggctgcgtgaacagcatcttgattggcgcgaactgtca
agatcagactgtgaacggctgtcggccgaagcggtcgagcgaatcgccccgcttatccag
cagcaagtgctctcaagctctcatcgctatgaatatatgaaacgaaaattgaaacacgtc
gttgcccgtacaacccatgtgttaagtgagcatgcgcgggcgagcggtttcgttccgatc
ggacttgagctgtcattcggccccaatggcgacctgccgccgcttcggtttcggcttcgc
gatggcacagtgatggagctcgtcggacggatcgaccgcgtcgacaaggcggaaagcagc
caaggggtgcttcttcgcatcatcgattacaaatcgagcgcgaaaacgctcgatttgacg
gaagtatattacggcctggcgctgcaaatgttcacctacctggacatcgtgctgacgtat
gccgaacagctcgtcggccagccggccttgccagccggggtgctttattttcacatccac
aatccgatcgttcaagcgaagcaatgggtggatgatgaggtggaaatggcgaaaaagctg
cttgaaccgtttcggatgcgcggactgttgctcgctgacgtcgaggcgatccggttgatg
gacaaccgaacggaagacggacaatggtcgctgattgtgcccgctcagcttacgaaaagc
ggatcgatccattcgcgttcgtcggtggcgagtccatccgactttgccgcgctccgccag
catgtccgccgtttgttcatcgacatcggcgggcaaatcgccgacggcgtcgtgtcgatc
gccccgtacaagttgaaagataaaacagcgtgcgagttttgcgtcttcaaaccggtctgc
caatttgatgaggcactctccggcaacgaataccggaagcttgccccgcaaacgaaggaa
gcggtcatcgaaaaactagcggaagggaaggaaggataa
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