Geobacillus thermocatenulatus: GT3921_16345
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Entry
GT3921_16345 CDS
T05178
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
gtm
Geobacillus thermocatenulatus
Brite
KEGG Orthology (KO) [BR:
gtm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtm03019
]
GT3921_16345
Messenger RNA biogenesis [BR:
gtm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GT3921_16345
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Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AST00458
UniProt:
A0A226Q3B2
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All DBs
Position
complement(3336232..3337209)
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AA seq
325 aa
AA seq
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MAKGIIHYEVGEQVDLFLLIKSATKGIASNGKPFLTLILQDKSGDIEAKLWDVSPDDEER
YVPECIVKVAGDIHNYRGKLQLRIRSIRPAHPGDAVRIDDFLEKAPLGREEMKAKVMEYI
FAMENPNIQRITRYLLKKYEKAFFEYPAATKNHHEFISGLAYHVVSMLELAKALIHLYPS
LNKDLLYAGVILHDLGKVMELSGPVSATYTLEGNLLGHISIMVSEISKAAEQLGIQGEEV
VILQHLVLAHHGKAEWGSPKPPLVKEAEVLHYIDNLDAKITMIDRALEKVKPGEFTERVF
ALDNRSFYKPAFLSVSKPKNAGSKE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaaggcatcatccattatgaggttggggaacaagttgatctctttttgctcatc
aaatccgcaacgaaaggcattgccagcaacggcaagccgttcttaacgttgattttgcaa
gataaaagcggcgacattgaagccaaactgtgggatgtctcgccggatgacgaagagcgg
tatgtgccggagtgcatcgtcaaagtggcgggagacatccataactaccgcggcaaattg
cagctgcgcatccgttcgatccgtcccgcacatccgggcgatgcggtgcgcatcgatgac
tttttggagaaggctccgctcggccgcgaggaaatgaaggcgaaagtcatggaatacata
tttgcgatggaaaatccgaacatccagcgcattacccgctatttgttgaaaaaatacgaa
aaggcgttttttgagtacccagcggcgacgaaaaaccatcatgaattcatctccggactg
gcgtatcacgtcgtgtcgatgcttgaactcgccaaggcgctcatccatctctatccgtcg
ctcaataaagacttgctttatgccggcgtcattttgcatgaccttggcaaagtgatggaa
ttatccggtccggtatcggcgacgtatacgcttgaaggaaatttgctcggacacatttcg
atcatggtgagcgagatcagcaaggcggcggaacagctcggcattcaaggggaagaagtt
gtcattttgcagcatcttgtgctcgcgcatcatggcaaggcggaatggggcagcccgaag
ccgccgcttgtcaaagaagccgaggtgcttcattacattgacaatttggatgcgaaaatt
acgatgatcgaccgcgcgcttgagaaagtgaaaccaggtgaattcaccgaacgtgtcttt
gcccttgacaaccgctcgttttacaaaccggcgtttttatctgtttcaaagccaaaaaac
gcgggtagtaaagagtag
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